Apium graveolens (celery): 141684620
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Entry
141684620 CDS
T11340
Name
(RefSeq) protein PIR isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
agrv Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141684620
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
141684620
Factors involved in mRNA localization
Other mRNA localization factors
141684620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
141684620
NCBI-ProteinID:
XP_074345779
LinkDB
All DBs
Position
9:152026855..152063513
Genome browser
AA seq
1286 aa
AA seq
DB search
MAVPVEEAIAALSTFSLEDDQPEVQGPAVCVSVERGATNSPIEYSDVSAYRLSLSEDTKA
LNELNTLINEGKEMGSVLYTYRSCVKALPQLPESMKHSQADLYLETYQVLDLEMSRLREI
QRWQASAASKLAADMQRFSRSERRINGPTVTHIWSMLKLLDVLVQLDHLKNSKASIPNDF
SWYKRTFTQVSVQWQDTDSMREELDDLQIFLSTRWAFLLNLHAEMFRVNNVEDILQVLIV
FSVESLELDFALLFPDRHVLLRVLPVLVVLATSSEKDSESLYKRVKINRLINIFRNDPVV
PAFPDLHLSPAAILKELSMYFQKFSAQTRLLSLPAPHELPLREAQDYQRHYLIINHIGAI
RAEHDDFTIRFASSMNQLVSLKSMDGADVEWCKEVKGNMYDMVVEGFQLLSKWTARIWEQ
CAWKFSRPCKDPISTEPLEASASYSDYEKVVRYNYTAEERKALVELVSYIKSIGSLVQRS
DTLVADALWETIHSEVQDFVQNTLATMLRTTFRKKKDLSRIISDMRTLSADWMANTSRPE
LELQSMQREGEESKGLIFYPRAVAPTTAQIHCLQFLIYEAVSGGNMRKPGGLFGNAASEI
PANDLKQLETFFYKLSFFLHMLDYTVTITTLTDLGFLWFREFYLESSRVIQFPIECSLPW
MLVDYVLESHNSGLFESILMPFDIYNDSAQHALVTLKQRFLYDEIEAEVDNCFDIFVLKL
SESIFTYYKSWAASELLDPSFLFALDNGEKFSVQPMKFTTLLKMTRVKLLGRTINLRSLL
AERMNKVFRENMEFLFERFESQDLCAIVELEKLLDVLHLAHELLSKDLSIDSFKLMLSET
QENISPVSYSSRLALQIWTEMQSDFLPNFILCNTTQRFVRSSKVPFAPVQKPSVPYAKAN
FYCGTQELNSAHQSFARLYSGFVGIPHVLSIVRLLGSKSLPWLIRALLDHISTKITTLEP
VISGLREALPKSIGLLPFDGGVTGCKRLVKEHLNWQSKSELKADGVCGIKEIGTVLYLMG
LLDIVLREEDTAHFLQTAPWLGLIPSVDGQILQSQGAGDSPIVTLFKSATTVTVSDPGRS
NPTSLHTISKQAEAADLLYKANINTGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDITT
SKDFYRIFSGLQFEYLEESVQIPPTNHDMLGDSVAWGGCTIVYLLGQQLHFELFDFSYQV
LNVAEVEAAAITQSQKNPHVVQGWEALLEAMKKARRLNNHVFSMLKARCPLEDKQACAIK
QSGAPLHRVKFENTVSAFETLPQKGS
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcctgttgaagaagccattgctgctctctctactttttccctcgaggatgac
cagccagaagttcaagggccagctgtgtgtgtttcagtagaaagaggtgcaacaaatagt
ccaattgaatacagtgatgtttctgcctatcgcctatcactctcagaagacacgaaagct
ctcaatgaactgaatactcttatcaatgaagggaaggagatgggatcagtgctctataca
tatcggagctgtgtcaaagcgcttcctcagcttccagaatctatgaagcatagtcaggct
gatttgtatctagaaacctatcaggtcctggacttggaaatgagtcgtttacgagaaatt
cagcgatggcaagcatcagcagcatccaagttagcagctgatatgcaacggttttccagg
tctgagagacgtatcaacggtcctactgtaactcatatatggtctatgttgaagctactt
gatgttttagttcaacttgatcatctgaaaaattcgaaggcaagcatacctaatgatttc
tcctggtacaagaggacatttacccaagtaagtgttcagtggcaagacacggattcaatg
cgggaggagttagatgatcttcagattttcttgagcacgaggtgggcatttttattgaac
ctgcatgctgagatgtttcgtgtaaataatgtagaagacattcttcaggttctcatagta
ttctctgttgagtcactggagttggattttgcccttctatttccggataggcacgttctt
cttcgtgttttgcctgttcttgttgtcttagcaacttcatcagaaaaagatagcgagtca
ttgtataagagggtcaagatcaacagactgatcaacatttttaggaatgatcctgttgta
cctgctttcccagacctccatctttctcctgctgcaatcttgaaagagttgtcaatgtac
tttcagaagttctctgcacaaactcgtcttctcagccttccagcacctcatgagctccca
ctccgtgaagcacaagattatcagcgtcattatttgatcatcaatcacattggagcaatt
cgtgctgagcatgatgattttactattcgttttgcttcatctatgaatcagttggtatca
ttgaaatcaatggatggtgcagatgttgagtggtgcaaggaagtgaaaggtaatatgtac
gatatggttgttgaaggctttcagcttttgagcaaatggacagctcgcatttgggagcaa
tgtgcatggaagttctcacggccatgcaaggatcctatttctaccgagccacttgaggca
tcagcatcgtattccgactatgaaaaggtggtaagatacaattatactgcagaagagcgg
aaagccctggttgaacttgtgagctatatcaagagcattggatccctggtgcagcggtct
gacaccttagtagctgatgcattatgggaaactatacattcagaagttcaggattttgtg
caaaatacattagcaactatgttgcgtacaacatttcggaagaagaaggatctgtcccgg
atcatttctgatatgcggacactttcagcagactggatggcaaatactagcaggcctgaa
ttggagttgcaatcaatgcagcgtgaaggggaagagagcaaagggctcatattttatccg
agggctgtagcaccaacaacagctcagattcattgcttgcagtttcttatatatgaggca
gtatctggcggtaacatgagaaaacctggtggactttttggaaatgctgcatccgaaatc
cctgcaaatgatttaaaacaattagaaaccttcttttacaagcttagtttttttctacac
atgttagactatacagtaactataacaactttgacggatcttggtttcctttggtttaga
gagttctacttggaatcgtctcgtgttattcagtttcccattgaatgctcccttccctgg
atgctagtcgattatgtgcttgagtcacataattcaggtctttttgagagtatactgatg
ccgtttgatatctataatgattctgctcagcacgcgctcgtaactctcaagcaaagattc
ctttatgatgaaattgaagcagaggttgataattgttttgatatatttgtattgaagcta
tcagaatctattttcacatactacaaaagctgggctgctagcgagttgcttgatccatca
ttcctatttgcactggataacggagaaaagttttcagttcagcctatgaaattcactaca
cttttaaagatgactagggtgaagttacttggaaggacaattaacttgaggagtctatta
gccgagaggatgaataaggtatttagagaaaatatggagtttctgttcgagcgcttcgag
tcccaagatctgtgtgctattgtggaactggaaaaacttctggatgtcttacatcttgct
catgagttgctatctaaagatctttcaatagattcttttaaactcatgttgagcgagaca
caagagaacatttcacctgtttcgtattctagccgtctagcattgcagatttggacagaa
atgcaaagtgatttcttgcccaatttcatcctttgtaatacaactcaacgttttgtccga
tcatcaaaagtaccctttgctccagttcagaagccatcagttccatatgccaaggcaaat
ttctattgtgggactcaagaactaaattctgcacatcaaagttttgctcgattatatagt
ggattcgttggaatacctcacgtgttatctattgtaagacttttgggatcaaaatcattg
ccttggcttattcgagcattactggatcatatctcaactaagataactacccttgagcca
gttatttcaggcttgagagaagcattgcccaaatcaattggattacttccttttgacggg
ggagtgacaggttgcaaaaggcttgtaaaagagcatctcaactggcagtcaaagtctgaa
ctgaaagcagatggagtttgtggtatcaaggagattggaactgtattatatttgatgggg
cttcttgatattgtcttgagagaagaagacactgcacattttttgcaaacagccccatgg
ttgggcttgatacctagtgttgatggacagatattacagtctcaaggagcaggagatagt
cctattgttactctgttcaaatcagcaactactgtgactgtgtcagaccctggccgctca
aatcctacatccttgcacaccatatcaaaacaagcagaagctgctgaccttttgtacaag
gccaacataaatactggaagtgtactggaatatgcccttgctttcacaagtgctgcactg
gacaaatattgcagtaaatggagtgctgctccaaagacggggtttattgatattacaaca
tcaaaggacttctaccgtatattcagtggcctacaatttgaatatcttgaagaatctgtt
cagataccaccaaccaatcatgatatgcttggtgattctgtggcctggggtggttgcaca
atagtctacttgctcggccaacaactacattttgaattgtttgatttctcatatcaagtc
ttaaatgttgctgaagtggaggctgcagcaattacacagtcacaaaaaaatcctcatgtt
gtccagggatgggaagcactattagaagctatgaagaaagctagacgactaaataatcat
gtattctcgatgctgaaagctcggtgcccattagaagataaacaggcatgcgccatcaag
cagagtggtgctcccctccaccgtgtgaaatttgagaacacagtatctgcctttgaaacc
ctgccacaaaaaggttcctga
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