Apium graveolens (celery): 141684774
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Entry
141684774 CDS
T11340
Name
(RefSeq) uncharacterized protein LOC141684774 isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
agrv Apium graveolens (celery)
Pathway
agrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141684774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141684774
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
141684774
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
DUF2249
Motif
Other DBs
NCBI-GeneID:
141684774
NCBI-ProteinID:
XP_074345994
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All DBs
Position
9:109178078..109182821
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AA seq
309 aa
AA seq
DB search
MNAGAFGGPGSSSSAVGAPVNKDQKMQSAEQLVLDLSNPDVRENALLELSKKRELFQDLA
PLLWNSFGTIAALLQEIVSIYPVLSPPNLTPVQSNRVCNALALLQCVASHPDTRMLFLNA
HIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEM
GSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLANMVAALAEQPSSRLLKHII
RCYLRLSDNPRACDALRSCLPDMLRDSTFSSCLREDPTTRRWLQQLLINVQGPRVTLQGG
GGFEHMMVN
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaggtgcattcggtgggccaggttcttcgtcgtcggcagtcggagctccggta
aacaaagatcagaaaatgcaatcagcggagcagctcgtgcttgatctcagtaatcccgat
gtcagagagaacgctcttctcgaactctctaagaagagagaattatttcaagatttggct
ccattattgtggaattcttttggtactattgctgcccttttacaggaaattgtttcaatt
taccctgtcttgtcaccaccaaatttgacgccagtacaatcaaacagagtctgcaatgcg
ctggcgcttctccaatgtgtggcttctcacccagatacgagaatgctgttccttaatgct
catattcctctatatctgtatccttttctcaatactactagcaaatcaaggccatttgaa
tacctaaggcttactagtctgggggtgattggtgccctggtgaaggtggatgatactgaa
gttataagtttcctgctatccactgaaattattccgctgtgcttacgtacaatggaaatg
gggagtgaattatctaaaacagtggccacattcatagtgcaaaaaatcttattagatgat
gttggcttggattacatctgtacaactgcagagcgattttttgctgtaggtcgagttctg
gcaaacatggttgctgctctcgcagaacaaccatcatcacggctgttgaagcatattatt
cgctgctacttgcgcttatcagataatccaagggcttgtgatgctttgagaagttgcctg
ccagatatgctgagagattctacatttagcagctgcctgagggaagatccgaccacgagg
aggtggttacagcagctgcttatcaacgttcaagggcctcgtgtcaccctgcaaggaggt
ggaggatttgagcacatgatggtaaactga
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