Apium graveolens (celery): 141687191
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Entry
141687191 CDS
T11340
Name
(RefSeq) protein CHROMATIN REMODELING 5-like isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
agrv Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agrv03021
]
141687191
03036 Chromosome and associated proteins [BR:
agrv03036
]
141687191
Transcription machinery [BR:
agrv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
141687191
Chromosome and associated proteins [BR:
agrv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
141687191
SLIK complex
141687191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
SWI2_SNF2
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
141687191
NCBI-ProteinID:
XP_074348485
LinkDB
All DBs
Position
9:181232752..181257315
Genome browser
AA seq
1717 aa
AA seq
DB search
MAFYRNYSSGPVSDGVLDEKGPGPGTGKVESIAGNVDGNLSDRDFDINLNAEYRSDGEAD
YDGKFQQDVGDSGALPDIQPSTRKMTSSGKWGSTFWKDCQPMRPGSDSGHESKSSSEFKN
GDGSEDESLGVREDRSESEDPDTVRRRQADVPVDEMPSDDYYEQDGDERSNDLMHHKLGN
TEIGLNSNSKPRPIVADMYQLRKSRALNDDEYGDDDADYEDDGDGDDPDDADFDPDITNE
RPNQDDDWEGENIDEDFNDVDDLDVSDEDDDFPRKSKGRQRGKGGLVSRNARVPKSIMPS
SQRKRGGPLFEDNESSAKDSENDSDEGFSGRARRGASLRKKKIARATSYMSSRDRETRTS
RRSVQKVSYAESEDSEENDESKKRKSQKEEIEEEDEDSIERVLWHQPKGMAEEALANNKS
TEPVLLSHLYDYEPDWNEMEFYIKWKGQSHLHCQWKSMHELQNLSGFKKVINYTKKVMED
VKYRKAVSREEIEVHDVSKEMDLDLIKQNSQVERVIAERVSKDSLDNVEYLVKWQGLSYA
EATWEKYLDISFAQEVINEFKAREAAVEIQGKMVDVQRRKSKASLRKLDEQPEWLKGGKL
RDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSISMLGFLQKAQQIHGPFLVVVPLST
LSNWAKEFKKWLPEMNVIIYVGARASREVCQQYEFYSDKKNGRGIKFDALLTTYEVLLKD
KGVLSRLKWNYLMVDEAHRLKNSEAALYITLAEFSTKNKLLITGTPLQNSVEELWALLHF
LDPDKFKSKDEFVQNYKNLSSFNESELANLHMELRPHILRRVIKDVEKSLPPKIERVLRV
EMSPLQKQYYKWILERNFQDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGET
NITGSSKLERVILSSGKLVILDKLLDRLNETNHRVLIFSQMVRMLDILAEYLSIKGFKFQ
RLDGSTKAEVRHQAMEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDL
QAMSRAHRIGQQDVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGKLEKKETK
KGSSFDKNELSAILRFGAEELFKEDKNDEESKKRLLSMDIDEILERAEKVEEKGPHEEEG
NELLSAFKVADFCTAEDDGSFWSRWIKPEAVNQAEEALAPRAARNSKSYVEANLPEKLNK
RRKKGVETQERSTKRRKSDTSFFVPAIDGATAQVRGWSYGNLPKRDATRFFRAVKKFGND
SQIGLIAAEVGGSVEAAPIDAQIELFDALIDGCREAVDGMNLDPKGPTLDFFGVPVKADD
LLTRVEELQLLAKRISRYEKPISQFQALMYLKPATWSKGCGWNQKDDARLLLGIHYHGFG
NWEKIRLHEKLGLTKKIAPVELQHHETFLPRAPQLKERASQLLEMEFIAVSGSNSNAKAS
RKASKKQKENSSAFSLSRSKAKQGKPGLPKYNSQITKMKAARTQKVEPLVKEEGEMSDTE
EVYEQFKEVKWMEWCEDVMADEKKTLTRLQRLQTTSSELPKEKVLSRIRNYLQILGRRVD
QIVFEHEEELYKQERMKTRLWKYISTFSNLSGEGLYQIYSKLKQEQDAIGPEPSQVNGFS
RGYKYETSNQISVVQRGIDTGKFEAWKRMKRAEAADINSVVQPLHERSSSNATRISDPNL
SGILGSGPSDNRSGNEKSYKMRSSGQPSRKGFPSGVK
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atggcattttataggaattactcgagtgggccagtttcggatggtgtattggatgagaaa
ggaccgggaccgggtacgggaaaagttgaaagtattgcaggaaatgtagatgggaattta
agtgatagggattttgatataaatttaaatgccgagtataggagcgatggcgaagcagat
tacgatggtaagttccaacaggatgtaggtgacagtggcgctttacctgatatacagcca
tctacgaggaaaatgacttcgtctgggaaatggggttctaccttttggaaggactgtcaa
cccatgcgtcctgggtctgattcgggccacgaatcaaaaagtagttctgaatttaaaaat
ggggatgggtctgaagacgaatcgttaggggtcagagaggataggtcagagtctgaagat
ccggacacggttcgaagacggcaggctgatgtaccagtggatgagatgccttctgatgat
tattatgagcaggatggtgatgagcgctctaatgatttaatgcatcataaactaggaaac
actgaaattggcctgaattcaaattcaaaacctaggcctattgttgctgacatgtatcaa
ttgagaaagtcaagagctttaaatgatgatgaatatggcgatgatgatgctgattatgag
gatgatggagatggagatgatcctgatgatgcagattttgatcctgacatcactaatgaa
cgcccgaaccaggatgatgactgggaaggtgaaaatatagatgaagattttaatgatgtt
gatgaccttgatgtttcggatgaagatgatgattttcctagaaaatctaaaggtaggcaa
cgtggaaaaggcgggcttgtttcaagaaatgcaagagtacctaagtcgattatgccatct
agtcagcgaaaaagaggtggaccattgtttgaagataatgaatcatctgcaaaggattct
gaaaatgacagtgatgagggttttagtggtagggctaggagaggagcaagcttacggaag
aaaaaaattgctcgcgccacatcttatatgtctagtcgagatagggaaacacgaacttca
agacggtccgtccagaaagtatcatatgccgaaagtgaggatagtgaggaaaatgatgaa
tctaagaaaaggaagagtcaaaaggaggagattgaagaggaagatgaagactcaattgaa
agggtattgtggcatcaaccaaaaggcatggccgaggaggcattagcaaataacaaatcg
acagagcccgtgcttttaagtcacttatatgactatgaaccagactggaatgaaatggaa
ttttatattaaatggaaaggccaatcacatttgcactgccaatggaagtcaatgcatgaa
ctacaaaatcttagtgggtttaagaaggtcattaattacacaaaaaaagtgatggaagat
gtcaagtatcggaaagctgtctcacgggaggagattgaggtccatgacgtgagcaaggaa
atggacttagatctcatcaaacaaaacagtcaggtggaaagggtaattgcagaaagagtc
agcaaggacagtttagataatgttgagtacttggtgaagtggcaaggactgtcttatgct
gaagcaacttgggagaaatacttggatatatcatttgctcaagaagtcatcaacgagttt
aaggcccgtgaggcagcagtcgaaatacaggggaaaatggtagatgttcaacgaaggaaa
agcaaagcaagtttgaggaagcttgatgaacaacctgaatggttgaagggtggtaaactc
agagactatcagcttgagggattaaactttcttgttaacagttggagaaatgatacgaac
gtcatattagctgatgaaatggggctgggtaaaactgttcagtcaatttctatgcttggt
tttctgcagaaagctcaacaaattcatggtccatttcttgttgttgttccattatcgaca
ttatcaaattgggcaaaagaatttaaaaaatggcttcctgaaatgaatgtcatcatatat
gttggagcccgtgcaagccgagaggtttgtcaacaatatgagttctactctgataagaag
aatggcaggggcataaagtttgatgccctgttgactacatatgaagtactactgaaggac
aagggagtgctttctaggcttaagtggaactatctcatggttgatgaagcacataggtta
aagaacagtgaagctgcattgtatataacacttgcggaattcagcactaaaaataagttg
cttattactggtactccactgcagaacagcgtcgaggaactttgggctctgcttcacttt
cttgatcctgataagttcaagagcaaggatgagttcgttcagaactacaaaaatctaagt
tcgttcaatgaaagtgagctcgccaatcttcatatggaattgaggcctcacattctccgg
agagttatcaaggatgtggagaagtccttgcctccaaagattgagcgtgttttaagagtt
gagatgtctcctcttcagaaacagtactacaagtggattttagaacgcaatttccaagac
ttaaacaaaggagttcgtgggaatcaggtttctcttctaaatattgtggttgagttaaag
aaatgttgcaaccatcctttcctatttgaaagtgcagatcatggttatggaggggaaaca
aatattactggaagtagtaaactggaaagagtaattttgagcagcgggaagctagttata
cttgataagcttcttgacagactaaatgaaacaaaccatcgtgtattgatattttcacag
atggttaggatgcttgatattctggcagaatacctatcaattaaagggttcaagttccaa
aggcttgatggaagtacaaaagctgaagttcgccatcaagctatggagcattttaatgca
cctggtagtgatgatttctgtttccttctttcgactcgtgctggtggcttaggtatcaat
cttgcaacagcggatactgttatcatatttgattctgattggaatccacaaaatgatttg
caggccatgagtagagcacacaggattgggcagcaagatgttgtgaacatttaccggttt
gttacaagtaagagtgttgaggaggatattctggaacgtgctaaaaagaaaatggttctt
gatcatttggtaattcaaaagctgaatgccgaggggaaattggaaaagaaagaaacgaag
aaggggagttctttcgacaaaaatgagctatcagcaatcttgaggtttggtgcagaagaa
ctattcaaggaagacaaaaacgatgaagaaagtaaaaagcggcttcttagtatggatata
gatgaaattcttgagagagcagaaaaagtagaagaaaagggtcctcatgaagaggaagga
aatgagttgctaagtgctttcaaggttgctgatttctgtactgctgaagatgatgggagt
ttctggagccggtggattaaacctgaagctgttaaccaggcagaagaagctttagctcct
agagctgcaagaaacagcaagagttatgtagaggctaacctgcctgagaaacttaataaa
aggagaaagaaaggtgtcgagactcaggaaagatctacaaagcgccggaaatcagatact
agtttttttgtaccggctattgatggtgctactgctcaagtaagagggtggtcttatggt
aatctgccaaagagagatgctacacgttttttccgtgcagtgaagaaatttggcaatgat
agccaaattggcttaatagcagcagaagttggtgggtcagttgaagctgctccaattgat
gcacaaattgagctttttgatgctttgattgatggatgtcgagaagcagtcgatggaatg
aatctggacccaaaggggcctacgctagattttttcggtgttcctgtcaaggctgatgat
ctattaacccgtgttgaagaacttcaactcttagcaaagcgcattagccgttatgaaaaa
ccaatctcacagttccaggcattgatgtacctcaaacctgcaacttggtctaaaggttgt
ggatggaaccagaaggatgatgcaagattgcttctaggaatccattatcatgggtttggc
aattgggagaagataaggctgcatgaaaagcttggtcttacaaagaaaattgcaccagta
gaactccagcatcacgagactttcttgcctcgggctcctcagttgaaggagagggcctct
caactactagaaatggaatttattgctgtcagtgggagcaactcaaatgccaaagctagc
cgcaaagcttccaagaagcaaaaagaaaattcttcggccttttcattgtctcgcagcaag
gcaaagcaaggcaaaccgggattgccgaaatataattctcagataactaagatgaaggct
gcaagaacccagaaggttgaaccgttggtaaaagaggaaggtgaaatgtcagatactgaa
gaagtctatgaacagttcaaggaagtgaaatggatggaatggtgtgaggatgtcatggct
gatgaaaaaaagacgctgacgcgtcttcagaggttgcaaactaccagttcggagctccct
aaggaaaaggtgctatccagaataagaaattatctgcagatccttggacgaagggttgac
caaattgtttttgagcacgaggaggaactatataagcaagaaaggatgaaaacacgatta
tggaaatatatatctactttttccaatttgtctggagagggactttatcagatctactcc
aagttaaagcaggagcaggacgcgataggaccagaaccttcccaggttaatggtttctca
cgtggttacaaatatgaaacctccaatcagatttctgtagttcaaaggggtattgacaca
ggaaaatttgaagcttggaaacgaatgaaaagagccgaggctgctgatattaactctgta
gttcaacctctgcatgaaagatcttcaagtaatgctacacgtatatcagacccaaattta
tctgggattttaggatcaggaccatctgacaacagatctggtaatgagaagtcttataaa
atgcgctcaagtggtcaaccttcacgaaaaggcttcccatcaggtgtaaaataa
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integrated database retrieval system
