Apium graveolens (celery): 141687215
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Entry
141687215 CDS
T11340
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141687215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141687215
03016 Transfer RNA biogenesis [BR:
agrv03016
]
141687215
Enzymes [BR:
agrv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
141687215
Messenger RNA biogenesis [BR:
agrv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
141687215
Transfer RNA biogenesis [BR:
agrv03016
]
Prokaryotic type
tRNA degradation factors
141687215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
CvfB_2nd
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
141687215
NCBI-ProteinID:
XP_074348516
LinkDB
All DBs
Position
9:complement(21419632..21429303)
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AA seq
985 aa
AA seq
DB search
MASLAIRRNHHLFSHPYILKWRSSTLRNIHSSTFALSQSSTQSELEFPVSGTKFLETFTE
EFEIGFRKIVLETGKIARFANGAVVMGMDETKVLSAVTSAKGDSVKDFLPLTVDYQEKQF
AQGVIPNTFMRREGAPKERELLCGRLIDRPIRPLFPAGFFHEVQVSANVLSSDGKQDPDV
MAANATSAALMLSDIPWNGPIGMIRMGRICGKLIVNPSMDELTISDLNLVYACTKDKALM
IDVQAREITERDLKDALKLAHVEAVKYIDPQVRLAGKAGKGKKEYKLSLISKETYEKIRT
LAEEPIKTIFTDPAYGKFERGEALENITRDIRTALEEECDEESLKVLPKTVDKVRKEVIR
KRIIDEGCRLDGRGLDEVRPVYCEAGNLPVLHGSSLFSRGDTQVLCTVTLGAPGDAQRLE
SLVGPSTKRFMLHYSFPPFCINEVGKRGGLNRREVGHGTLAEKALLAVLPPEDDFPYAVR
INSEVMASDGSTSMASVCGGSMALMDAGIPLREHVAGVSVGLVTDVDPSTGSIKDYRILT
DILGLEDHLGDMDFKVSGTRHGITSIQLDIKPAGIPLDIICESLEPARKGRLQILDHMER
EINAPRSQDDRNSPRLVILKYNNDAIRRLIGPLGVLKRKIEEETGARMSVSDGTLTVVAK
NQSAMEKVQEKIDFIVGREIEIGGTYKGIVMSIKEYGAFVEFNGGQQGLLHISELSHDPV
SKISDVISIGQQVTLRCIGSDVRGNIKLSLKATQPQRTSNMAADFVSSTTEAPKVWPPVN
DIRSTEQDKQELSTEDRPLHNENSDIASSSSSEILIRSASECDEVEESAGLVRNSNSKTK
TSNNKRSDNKSKVVSPQKNGPDSPISAFDLFSSKKSSEFKTGFSFRSNEIDKGNTPASRD
GLNHKEAPAEAPTNAKNLKIGSEVSAKVHQIRAHGLVLDLGGGLRGMFKFEKGGRRDFEV
GEVVQAKCCSFSGKGIPVMSITETD
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcattagctatcagaagaaatcaccatctcttctctcatccttacattctcaaa
tggagatcttctactcttcgcaacattcactcttccacttttgccctttcacaatcctct
acacaatcggaattagagtttccagtttctgggacgaagtttctagaaacttttacagaa
gagttcgagataggttttagaaagatagtgcttgaaacggggaaaattgctcggtttgca
aatggtgcggtggttatggggatggatgagactaaggttttgtccgctgttacttctgcc
aaaggcgattcggttaaagattttttacctctcactgttgattatcaagaaaaacagttt
gctcaaggtgtgattcctaatacatttatgcggagggagggtgctcctaaagaacgtgag
ttattatgtggtcggcttattgataggcccatacgaccacttttccctgctggattcttc
catgaggttcaggtatcagcaaatgttctttcgtctgatggtaagcaagatccagacgtg
atggcagctaatgccacatcagctgctcttatgctttcagatataccttggaatggtcca
attggtatgattcgtatgggaaggatttgtgggaaattaatcgtgaatccaagcatggac
gagcttactataagtgatctcaacttggtatacgcctgcacgaaagacaaagctttgatg
atagatgttcaagctcgggagatcacggaaagagatctgaaagatgcactcaagcttgcc
catgttgaggcagtaaaatatattgaccctcaagtcagactggcagggaaagctggcaaa
ggaaagaaggaatataagttgtctttgatatcaaaggaaacttatgaaaaaattaggact
ttggccgaagaacctatcaaaactatttttacagatcctgcatatgggaagtttgaacga
ggagaagccttagaaaacattactcgagatatcagaacggctctagaagaagaatgtgat
gaagaaagtctgaaagtattacctaagacggttgataaagtcaggaaagaggttatccgc
aaaagaattattgatgaggggtgtagactggatggaaggggcctggatgaagttaggccc
gtgtattgtgaagctggtaatttacctgtactacatggatcatcactcttttctcgtggt
gatactcaggttctttgtactgttacccttggagcacccggagatgcacaacgtttggaa
tccctggtcggcccatctaccaagcgatttatgctacattatagtttccccccattctgt
atcaatgaagttggtaaacgaggtggtttgaataggcgtgaggtcggacatggcactctt
gccgagaaggctctgcttgctgttttacctcctgaagatgattttccttatgcggttcgt
atcaattcagaggtcatggcttctgatggttctacttcaatggcatctgtgtgtggaggt
agtatggcgttaatggatgccggaattccgttacgagaacacgtagcaggggtctcagtg
ggccttgttactgacgttgatccatctactggcagtataaaagattaccgtatactaact
gatattctgggattggaagatcatcttggggatatggactttaaagtttcaggaacacgt
catggaataacatcaattcagttagatataaagcctgctggaattccactcgatataatt
tgtgagagtttagaaccagcacgtaaaggtcgactacaaattcttgatcacatggagcga
gaaataaatgcaccacgttctcaggatgacaggaactctcctcgattagttatcctaaag
tacaacaatgatgccatccgacgcttgattggtccgcttggtgtcttgaagagaaaaatt
gaagaggaaacaggtgcacggatgtcagtgagtgatggaacacttactgtagttgcaaaa
aatcagtctgcaatggagaaagtacaggagaagattgacttcatagttggccgtgagatt
gaaattggaggtacttacaagggtatcgtaatgtcgataaaggaatatggtgctttcgtg
gagttcaatggcgggcaacaaggcctcttacacatttctgagttatcgcatgatccggta
tccaagatctcagatgtgatatccatcgggcagcaagtaactttaaggtgcataggctca
gatgtacgtggcaatattaagttatcactaaaagctactcaaccgcaaaggacaagtaat
atggccgctgactttgtttcttcgacgacagaagcacctaaagtttggccaccagttaat
gatataagaagtactgaacaggataaacaagaattgtcaacggaggataggccattgcac
aacgaaaatagtgacatcgcctcttcttcatcatcagaaattttaattcgtagtgcttct
gagtgcgatgaggtggaagaatccgctggtttagttaggaattctaatagcaagaccaag
acctcgaataataaaagatctgataacaagtcaaaagtagtctcacctcaaaagaatggc
cctgattctccaatctctgcttttgatttattttcatcaaaaaaatcaagtgaatttaag
acaggtttcagcttcagaagtaatgaaattgacaaaggtaacacccctgcatccagggat
ggtctaaatcataaagaagccccagctgaggctcctaccaatgcaaaaaatctaaagatc
ggaagcgaggtgtcagccaaggttcatcaaatacgggcccacggattagtcctggacttg
ggcggtggacttcgtggaatgtttaaatttgagaagggtgggagaagggactttgaagtt
ggggaagtggtgcaagcaaaatgttgtagcttttctggcaaggggatccctgtaatgtcc
ataactgaaactgattaa
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