Apium graveolens (celery): 141689367
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Entry
141689367 CDS
T11340
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
agrv Apium graveolens (celery)
Pathway
agrv04142
Lysosome
agrv04144
Endocytosis
agrv05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141689367
04142 Lysosome
141689367
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
141689367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
agrv04131
]
141689367
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agrv04147
]
141689367
Membrane trafficking [BR:
agrv04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
141689367
Exosome [BR:
agrv04147
]
Exosomal proteins
Proteins found in most exosomes
141689367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
141689367
NCBI-ProteinID:
XP_074349742
LinkDB
All DBs
Position
10:173836476..173849505
Genome browser
AA seq
1730 aa
AA seq
DB search
MAAANAPITMKEALTLPSIGINAQFITFTNVTMESEKYICVRETAPQNSVVIIDMSMPSQ
PLRRPITADSALMNPNSRILALKASLPGTTQDHLQIFNIELKAKIKSYQMPEQVVFWKWI
TPKLLGLVTQASVYHWSIEGESEPVKMFDRTANLANNQIINYRCDPSEKWLVLIGIAPGS
PDRPQLVKGNMQLFSVDQQRSQALEAHAASFASFKVQGNENPSILISFATKSSNAGQVTS
KLHVIELGAQPGKAAFTKKQADLFFPPDFNDDFPVAMQISHKYSLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTSEASSAGGFYAINRRGQVLLATVNESTIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAADSPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYAELPDIKRVIVNTHAI
EPQVCLYFLFLCLLVSQNILVLTIHFFSQSLVEFFGTLSKEWALECMKDLLLVNLRGNLQ
IIVQVAKEYSEQLGVDACIKLFEQFKSYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQ
IKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYI
EGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQ
FLEHLVSEGSQDVHVHNALGKIIIDSNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVA
YRRGQCDDELINVTNKNSLFKLQARYVVERMDGDLWDKVLNPENEYRRQLIDQVVSTALP
ESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRV
MDYVNRLDNFDGPAVGEVAVEAQLYEEAFAIFKKFNLNVQAVNVLLDNIQNIARAVEFAF
RVEEDAVWSQVGKAQLRDGLVSDAIESFIRADDATQFLEVIHAAEDGDVYHDLVRYLLMV
RQKTKEPKVDSELIYSYAKIDRLGDIEEFILMPNVANLHNVGDRLYDEALYEAAKIIYAF
ISNWAKLAVTLVKLKQFQGAVDAARKANSSKTWKEVCFACVDAEEFRLAQICGLNIIVQV
DDLEEVSEYYQNRGCFNELISLMESGLGLERAHMGIFTELGVLYARYRHEKLMEHIKLFS
TRLNIPKLIRACDEQQHWKELVYLYIQYDEFDNAASTVMNHSPDAWDHMQFKDIAVKVAN
VELYYKAVHFYLQEHPDLINDMLNVLALRVDHTRVVDIMRKAGYLHLVKPYMVAVQSNDI
SAVNEALNEIYVEEEDYDRLRESIDLHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGR
WKQSIALSKKDNLYKDAMETASQSGDRELAEDLLVYFIEQGKKECFASCLFVCYDLIRAD
VALELAWMNNMIDFAFPYLLQFIREYTGKVDELIKDKIEAAKEMKAKESEEKDVIKQQNM
YAQLLPLALPAPPGMGGAGMSGYGQPPPQGMGGMGMPPMPPFGMPPMGGY
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgaacgctccgatcactatgaaagaggcgcttacgttgcctagtattggg
atcaatgcacaattcatcacctttacgaatgttacaatggaatcggagaagtatatatgt
gttcgggagactgcaccacagaacagtgtagtaattattgatatgagcatgccgtcgcag
cctttgaggaggcctattactgctgattcggctctcatgaatccgaattcgagaattctt
gctttgaaagcttcacttcctggaactactcaggaccacttacaaatatttaacattgag
ctgaaggcaaaaattaagtcataccagatgccggagcaggtggtgttttggaagtggatc
acaccgaaattgttgggtttggtcactcaagcctctgtgtatcattggtctattgaaggc
gagtccgaacctgttaaaatgtttgatagaacagctaatttggcaaacaatcagattata
aattatagatgcgatccgtcagagaaatggctggttctgattggaattgctcccggttca
cctgataggccccaattggtgaagggcaacatgcaacttttttctgtggatcagcagcgc
agtcaggctcttgaagcacatgcagcctcatttgcctcatttaaggttcaagggaatgag
aatccatcaattcttatttcttttgcaacaaaaagctcaaatgctggacaagttacatca
aaattgcatgttatcgagctcggtgcccagccagggaaagcagcttttacaaagaaacaa
gcagatctgttctttcctcctgattttaatgacgattttccagttgccatgcagatatcc
cataaatacagtttgatttatgtgattaccaagctaggacttctatttgtttatgatctt
gaaacagcaactgcagtctacagaaataggattagcccagatccgattttcttaacatca
gaagcttcatctgctgggggtttctatgccattaatagaagaggtcaagtgttacttgct
actgtaaatgaatctactattgtgccttttgtcagtggccaattgaataaccttgaactt
gctgtcaatcttgctaaaagaggaaacctacccggtgcagagaatttggtggttcagcgg
ttccaagagctatttgctcaaacaaagtacaaggaggctgctgaactagctgcagattct
cctcaaggaatcctccgtacccccgacacagttgccaaatttcagagcgttcctgtccaa
gctggacagactccgcctctcctacagtactttggaacactactgacaaagggaaagcta
aatgcattcgagtctctagaactttctcggcttgttgtgaatcaaaataagaagaatctt
ttggagaactggttggctgaggacaaactggaatgtagcgaggaacttggggacctcgtt
aagactgttgataatgatcttgccttgaaaatttatatcaaagcaagagcaactccaaaa
gtcgtggctgcttttgctgaaagaagagagtttgacaaaattcttatctactccaaacag
gtcggctatacacctgattatctgttcctcctgcaaacaatccttagatcagatccccag
ggagctgtaaattttgcactcatgatgtcgcaaatggagggaggttgtccagttgactac
aacaccataactgatctttttcttcagaggaacctgatccgtgaggcaacagcatttttg
ttggacgttttgaagccaaatttgccagaacacgctttcttacaaactaaggttttggaa
ataaaccttgttacctttccaaatgttgctgatgctattttagcaaatggcatgtttagc
cattatgatcgtcctcggattgcccaactttgtgaaaaagccggtctttatgttcgagct
cttcagcactacgcagagttgcctgatattaaacgtgttatcgtgaatactcatgcaatt
gagccacaggtttgtctttacttcctgttcttgtgcttgctggtgtctcagaatattctc
gtacttacaatacattttttttcccagtcccttgtggaattctttggcaccctatccaaa
gaatgggctttggaatgcatgaaggaccttttacttgtcaatctgagaggcaaccttcag
attattgtccaggttgccaaagaatattccgagcagttgggcgtggatgcttgtataaaa
ctctttgagcaatttaagtcatatgaggggctgtacttcttccttgggtcttatctgagc
tctagtgaggatcctgatattcacttcaagtacattgaggcagctgctaagactggacaa
atcaaggaagttgagcgtgtgacaagagaatcaaatttctatgatgctgaaaaaacaaag
aactttttaatggaagccaaacttccagatgcacgcccactgattaatgtttgtgaccgc
ttcggtttcgttccagatcttacacactacctatatacaaacaatatgcttcgctatatt
gaaggttatgtgcagaaggtcaatcctggaaatgctcctttggttgtcgggcaactgcta
gatgatgagtgtcctgaagatttcattaaaggtctgatcctatcggtacgatctcttctt
ccagttgaacccctggtggatgagtgtgagaaaaggaatcggcttcggttacttacccag
tttttggagcatcttgtgagtgaaggaagtcaggatgtacatgttcataatgctcttggt
aagatcatcatagatagcaacaacaatccagaacactttctcactaccaacccgtattat
gattcccgtgtggttggaaaatactgtgagaagcgagatccaacacttgctgtggtcgca
tatcggagagggcaatgtgatgatgaattgattaatgttacgaacaagaattctttgttc
aaattgcaggccaggtatgttgttgaaaggatggatggagatctctgggacaaggttctt
aatcccgaaaatgaatatagaagacagctcattgatcaagtcgtttctactgctcttccc
gaaagcaagagccctgagcaagtttctgccgctgttaaagctttcatgactgctgatctt
cctcatgagttaattgagctcttggaaaagatagtgcttcagaactctgcatttagtggg
aactttaacctgcagaacttgcttatcttaactgccattaaggccgatccgtctagagta
atggactacgttaataggctggataatttcgacggacctgctgttggggaggtggcagtg
gaagcacagttgtatgaagaagcttttgcaattttcaagaagtttaacttgaatgtccaa
gctgttaatgttctactggataatattcaaaatattgcacgggctgtagagtttgctttt
cgagttgaagaagatgcagtttggagccaggtgggtaaagctcaactgagggatggtttg
gtaagcgatgcgattgagtcatttattcgtgctgatgatgcaactcaatttctggaagtt
attcatgctgctgaggatggtgatgtttatcacgacttggtaagataccttctgatggtt
aggcagaagacaaaagagcccaaggtggacagtgaacttatctattcctatgcaaagatt
gatagacttggtgacattgaagagttcattctcatgccaaatgttgctaatctgcataat
gtcggggaccggttgtatgatgaagccttgtatgaggcagcgaagataatctatgcattt
atttctaactgggccaagttggctgtcacccttgttaaactaaaacaattccaaggtgct
gttgatgccgctcgaaaagcaaatagctcaaaaacatggaaagaagtttgttttgcttgt
gttgatgcagaagagttccgtttggctcagatttgtggtctcaatattattgtccaggtt
gatgacttagaagaggtcagcgagtactatcagaacagaggatgctttaatgaactgatc
tctcttatggagagtggtttagggttggaacgtgctcatatgggaatcttcactgagttg
ggggtcctctatgctagatatcgccacgagaagcttatggagcatattaaactattttct
acccgtctcaacatccccaagcttattcgagcttgtgatgaacaacaacattggaaggag
cttgtgtacttgtatattcagtatgatgaatttgacaatgctgcttcgactgttatgaat
cattccccagatgcttgggatcacatgcaattcaaagatattgcagttaaagtggcaaac
gtagagctttattacaaggctgtccacttttacttacaagagcatcctgatcttatcaat
gatatgctcaatgttctagcactacgtgttgaccatacacgtgtggttgatattatgcgg
aaggcgggttatctgcatcttgtgaagccctacatggttgcagttcagagcaatgatata
tctgcagtcaatgaggctctaaatgaaatttatgtagaggaggaagactatgacaggttg
cgtgagtcgattgacttgcatgataactttgatcagatcggccttgcacagaagattgag
aagcatgaacttcttgagatgagaagagtagctgcttatatttacaaaaaagctggcaga
tggaagcagtctattgcgctttctaagaaagacaatctttacaaagatgcaatggagact
gcttcacaatctggagatcgtgaactggctgaggacttgcttgtatatttcattgagcag
ggaaagaaggaatgctttgcatcatgcctcttcgtttgttatgatttgattcgtgctgat
gttgctcttgaactcgcttggatgaataacatgattgactttgcattcccgtacctgttg
cagtttatacgtgagtacacaggcaaagttgatgaattaattaaggacaaaatagaggca
gctaaagaaatgaaggctaaggaaagtgaagagaaggatgtgattaagcaacagaatatg
tatgcccagttgttgcctcttgctttgccggcaccaccgggtatgggaggagctggaatg
tcaggatatggccagccaccaccacaaggtatgggaggaatggggatgcctccaatgccc
ccatttggcatgccaccaatgggaggatattga
DBGET
integrated database retrieval system
