Apium graveolens (celery): 141689543
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Entry
141689543 CDS
T11340
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
agrv Apium graveolens (celery)
Pathway
agrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141689543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agrv03041
]
141689543
Spliceosome [BR:
agrv03041
]
Common components
Common spliceosomal components
SR proteins
141689543
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_YTH1
RRM_7
Motif
Other DBs
NCBI-GeneID:
141689543
NCBI-ProteinID:
XP_074349983
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All DBs
Position
10:complement(203846608..203853174)
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AA seq
293 aa
AA seq
DB search
MSRSSKVLYVGNLPGDVREREVEDIFYKYGRIAHIDLKIPPRPPGYAFVEFEEARDAADA
MRGRDGYDFDGHRLRVELAHGGRGNGNLSSTDRHSNHGGGRGGGRGGGVSRRSDYRVMVS
GLPSSASWQDLKDHMRRAGDVCFAQVFREGGGTTGVVDYTNYDDMKYAVRKLDDSEFKNA
FSRGVIRVKVYDSSRSPGPSRGRSCSRSRSRSKSRSRSKSKSPKPKSSRRSRSRSRSVSS
RSRSRSRSNPRALSRSQSRSRSPVPPRQKHVSKSPRKSKSPSRSRSCSNSRSR
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagtagatcaagtaaagtgctgtatgttggcaatctccctggcgatgttcgcgagcgc
gaagtcgaagatatcttttacaagtatggacgaattgctcatattgacttaaaaattcca
ccaagaccccctggctatgcatttgttgagtttgaagaggctcgtgatgctgctgatgct
atgaggggacgtgatggctatgactttgatgggcatcgcttacgggtcgagcttgcacat
ggtgggcgtggtaatggcaatttatcttcaacagatcgacacagtaatcatggcggtggt
cgtggtggtggacgtggtggaggcgtgtcgaggcggtcagattatcgtgtcatggtgagc
ggattaccctcttctgcatcatggcaagaccttaaggatcatatgcggcgagcaggagat
gtatgcttcgcacaagttttccgcgagggtggcggcacaaccggtgttgttgattacaca
aactatgacgatatgaaatatgctgtcaggaagttggatgactccgaatttaaaaatgca
ttctctcgcggtgtaattcgagtgaaggtttacgattcaagccgcagtccaggtccctct
agaggccggagttgcagccgcagtcgtagtcggagtaagagtcggagtaggagtaagagc
aaatccccaaaacccaaatcttcacgtcgttcaagatctcgttcgaggtccgtatcttct
cgctccaggtctcgctccagatcgaatccgcgtgctctgtcaagatctcagtcaagatcc
aggtctccagtaccacctcggcagaaacatgttagtaaaagcccaagaaagagcaagagc
ccaagtcgtagccgtagctgtagcaatagcaggtccaggtga
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