Apium graveolens (celery): 141689737
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Entry
141689737 CDS
T11340
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
agrv Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
agrv03009
]
141689737
Enzymes [BR:
agrv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141689737
Ribosome biogenesis [BR:
agrv03009
]
Eukaryotic type
90S particles
Helicases
141689737
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
Utp25_C
T4SS-DNA_transf
ParD_antitoxin
Motif
Other DBs
NCBI-GeneID:
141689737
NCBI-ProteinID:
XP_074350194
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All DBs
Position
10:207290759..207296488
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AA seq
529 aa
AA seq
DB search
MSKDTSFLFSGIKFDRKKFAADFSKFKEKKETADTDEQFLENENSAPEAETLPVVKKRKR
KSKVSSSVSVEGFNVFKASTSEIVPKDNDVNEVDSEAKKEYHRQMERDALLRKKHNIHVS
GMNVPSPLQTFSELRSRYKCRSFLVRNLAELRFKEPTPIQRQAIPVLLSGRECFACAPTG
SGKTMAFVCPMLIKLKHASTDGIRGLILLPTRELAAQTARECKKLTKGTKFRIKLMTKQL
VKSADFSKLHCDILISTPYRVQYAVRKKKLDLSRVEYLVLDESDKLFELGLVKQVDTIVK
ACSNPSIMRSLFSATLPDSVEELARTLMHDAVRVIIGRKNSASETIKQKLLYVGSEEGKL
LAIRQSFAESLNPPVLVFVQNKERAKELYNELKYDDIRADVIHADLSQTERENAVDNFRA
GKTWVLIATDVIARGMDFKGINSVINYDFPDSPAAYIHRIGRCGRAGRRGEAITLYTEAD
VPFLRNIANVITASGGEVPAWILALPKRKWKKHRPGREHISVKPQDDDE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagacacctcttttttgttctccggcatcaaatttgaccgtaaaaagttcgcc
gccgatttctccaagttcaaggagaagaaagaaactgctgatacagatgagcaatttctt
gaaaatgaaaattctgcgcctgaggcggagacattgccagttgtgaaaaagaggaaaaga
aagtccaaggtttcatcttcagtctcagtagaaggattcaatgtatttaaggcttcaaca
tcggagattgtgccaaaagataatgatgtgaatgaggttgattctgaagcgaagaaggaa
tatcacaggcaaatggagcgagatgcacttctgagaaagaagcataatattcacgtatct
ggtatgaatgttccatcgcctcttcaaactttttccgagttaagatcaagatataaatgc
agatcatttctggtgcgcaacttggcagagcttagatttaaagagccaacaccaattcag
aggcaggctattccagtcctcctatctgggcgggaatgctttgcttgtgccccaacaggt
tctggcaaaacaatggcatttgtctgtcccatgctaattaaacttaagcatgcttctacc
gatggtattcggggtcttatcctacttccaacacgagaattagctgcacaaacagcaaga
gagtgcaagaagctgactaaaggaacaaaatttcgtatcaagctgatgactaagcagctt
gtgaaatctgctgacttttccaaactgcattgtgatatattaatatcaacaccttaccgt
gttcaatatgctgttcgtaagaaaaagcttgatttaagcagggtggaataccttgtcctg
gatgaatctgataaattgtttgagcttggcttggtgaagcaagttgatacaattgttaaa
gcttgttcaaacccttcaataatgcgttcactatttagcgctacattaccagattcagtg
gaagagcttgcacgcacattaatgcatgatgctgtcagagtcattattggtagaaagaat
tctgcatctgaaacaataaaacagaaactattatatgttggaagtgaagaagggaaactg
cttgctattcgccagagttttgcagagagcttgaatccacctgtacttgtttttgtccaa
aataaagaaagagcaaaagagctttacaatgaattgaagtatgacgatataagggctgat
gtcatacatgctgatctatcgcaaacagagcgagaaaatgcagttgataatttcagagct
ggcaaaacatgggttttgattgcaactgatgttattgctcgtggtatggattttaaaggg
attaatagtgtgattaattatgatttcccggattctccagccgcatacattcacaggatt
ggtcgttgtggcagagcagggcggaggggagaagccattactctgtacactgaggcagat
gttccgtttctgcgtaacatagcgaatgtaataacagcttctggcggtgaggtaccagct
tggattctggcattgcccaaacgtaagtggaagaagcacagaccggggagagaacatata
tccgtgaaaccacaagatgatgatgaataa
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