Apium graveolens (celery): 141690236
Help
Entry
141690236 CDS
T11340
Name
(RefSeq) RNA polymerase sigma factor sigA isoform X1
KO
K03086
RNA polymerase primary sigma factor
Organism
agrv Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agrv03021
]
141690236
Transcription machinery [BR:
agrv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
141690236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
HTH_24
Motif
Other DBs
NCBI-GeneID:
141690236
NCBI-ProteinID:
XP_074351030
LinkDB
All DBs
Position
10:227211149..227216014
Genome browser
AA seq
506 aa
AA seq
DB search
MAATAVIGLSAGKRLLSSSVYYSDYGEKFCSSSDIGFTHHQVTSSKNVISSKKSNYSSNF
LSNRDTKSIKAIKEHVDTASIPSNLEPWFQSSKNLEVEMSDFDCSVDALLLLQKSMLEKQ
WNLSPEETLRNPSTRERSRKKIQVTGSGISARRRRIDTRRRALNQRSPQIELSTRKQQVS
VISPKLLQNHMRGYVKGVLSEELLSHTEVVHLSKKIRTGLHIEDRKSRLEERLGREPSEE
ELSASLNISRAELQTTLIECSLAREKLAMSNVRLVMSIAQRYENKGAEMADLVQGGLIGL
LRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLGLIRNAKTKLDE
RGITPSVANIAKCLNMSQKKVRNATEAVNRVYSLDREAFPSLNGLPGDTLHSYIADNRLE
NIPWHGVDEWALKDEVNKLMSTTLRERERDIIRLYYGLDNETLTWEDISKRIGLSRERVR
QVGLVALEKLKHAARRKKLEAMLVKQ
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggccgccactgcagttattggacttagtgcaggaaagagactcttgagttcttctgtt
tattactctgactatggggagaagttctgcagtagcagtgatattggattcacacatcat
caagttacttcttccaaaaatgtgattagttcaaagaaatccaattatagttctaatttt
ctgtcaaatcgagacaccaaatctattaaagctataaaagaacatgtggatactgcttca
atcccttcaaatttagagccatggtttcagagttccaagaatttggaggtggaaatgtct
gattttgactgttcagtagatgcactcctcttgctacagaaatctatgttggaaaagcaa
tggaacctttcacccgaggagactctgaggaatccttcaactagagaaagaagccgcaag
aaaatacaggtcacaggttcggggatatctgctcgacgtcgtagaattgatactaggagg
agagctctgaaccaaagaagtccgcagatcgaacttagtacaaggaagcagcaagtttct
gttatcagtccaaagttgctacaaaatcatatgaggggctatgtaaagggtgtcttaagt
gaagaattactcagccacacggaagttgtacatttatccaaaaaaataagaactggtctt
catatagaagatagaaaatcaaggctggaggaaagattaggacgcgagccttcagaggag
gaactttcagcttcgttgaatatttcccgtgctgagttacagactacgcttatagagtgt
tctttggcaagagaaaaactcgcaatgagcaacgttcgtctagtaatgtctattgcacaa
agatatgagaacaagggtgctgaaatggctgatcttgtacagggaggcctcattggatta
cttcgtgggattgagaaatttgattcttcaaaagggtttaaaatttcaacctatgtttat
tggtggatacggcagggtgtgtcaagagcattagttgagaactcaagaaccctaagattg
ccgacctatttgcatgaaagacttggtttaatccggaatgctaagaccaaattggatgag
agaggaataactccatcagtagctaacattgcaaaatgtcttaacatgtcccagaagaaa
gttaggaatgccactgaggcggtgaacagagtctactctcttgatagggaagcatttcct
tccttaaatggtcttccaggggatacacttcatagttacattgcagataatcgtctggag
aacatcccatggcatggagtagacgagtgggcactgaaggatgaagtaaacaagctcatg
agcaccacactaagggagagggagagagatatcatccgcctttattatggtttggacaac
gagacccttacttgggaggatataagcaaaaggattggtttatccagagaaagagttaga
caagtaggacttgtcgcactagagaaactaaagcatgctgcgaggaggaaaaaactagag
gccatgctggtaaaacaatga
DBGET
integrated database retrieval system
