Apium graveolens (celery): 141692703
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Entry
141692703 CDS
T11340
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB2 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
agrv Apium graveolens (celery)
Pathway
agrv03022
Basal transcription factors
agrv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
141692703
09124 Replication and repair
03420 Nucleotide excision repair
141692703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agrv03021
]
141692703
03400 DNA repair and recombination proteins [BR:
agrv03400
]
141692703
Transcription machinery [BR:
agrv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
141692703
DNA repair and recombination proteins [BR:
agrv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
141692703
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
141692703
NCBI-ProteinID:
XP_074353722
LinkDB
All DBs
Position
10:complement(146822024..146844992)
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AA seq
450 aa
AA seq
DB search
MPQVRIIAKNFMDMVASLPATKLDKLYHNAFICEAILRSLPPLAKKYVLQMMYIVDALTA
KLMEEWVPAEGMSKHRVAIDKLVQLRLFTETVDSRKRETSYRLNPTFQKNLQDHIIHGGV
LPREPMQINVRLPSSVDLDAYASEQWESFLLHLISSTEAEATKNISSSMMKIFQRGLLSQ
RDREAPMLTESGFQFLLMDTNAQLWYVIREYITHCEERGVDTSDLISFLLELSFHVSGEA
YNMNTLSNTQGSIVKDLADLGLVKLQQGMKESWFIPTKLAINLSISLSDASSRKQGYVVV
ETNFRLYAYTTSKLHCEILRLFARIEYQLPNLIVGAITKENLYKAFQNGITADQIICFLQ
QNAHPRVAEKVPSVPENVTDQIRLWESDLNRVEMTPSHLYDEFPSRDAFEAACDFAREYG
GLLWEDSVKMRLIVNAESYDHMKRFLRQKQ
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagtaaggattattgccaagaatttcatggacatggtggcttctttgcctgct
accaagcttgataagttgtatcacaatgcttttatctgtgaagccattctaagatctttg
ccacctctagccaaaaagtatgtgctgcaaatgatgtacattgttgatgctttaaccgct
aaattaatggaagagtgggtgcctgctgaaggaatgtcgaagcacagagttgccattgac
aaattagttcaattgagattatttaccgaaactgttgacagtaggaaaagagaaaccagt
tacagattaaatccaacatttcagaaaaaccttcaggatcatataatacatggtggtgtt
ttaccaagggaaccaatgcaaataaatgtgaggcttccaagctcagttgatttagatgcc
tatgcttctgaacagtgggagagtttcctgttgcaccttataagctctacggaagctgaa
gcaaccaaaaacatcagctcctctatgatgaaaatattccagagaggccttcttagtcaa
agagacagagaagctccgatgttaacagaaagtggttttcagttcttgcttatggataca
aatgcacaactgtggtatgtcatcagggagtatatcactcattgcgaggagcgaggtgtg
gatacttcagatctaatctcatttctactggagctcagtttccatgtttctggtgaggct
tataatatgaacacgctgagtaacacccagggatccatagttaaggaccttgcagacctg
ggattagtcaagctacagcagggcatgaaagaaagttggttcattccaacaaaattggct
atcaatctttcaattagtctatcagatgcatcatccaggaaacagggttatgttgttgtg
gagacaaactttaggctttatgcatatacaacgtctaagttgcattgtgagattttacgc
ctttttgcaaggatagagtatcagctgccaaatctcattgttggagcaattacgaaagaa
aatctctataaggcttttcaaaacggcatcacagcagatcagattatttgctttcttcag
cagaatgcacatcctcgagttgctgaaaaagtgccttctgtaccagagaacgtaactgat
cagataaggttgtgggaatcagatttgaatagggttgaaatgacaccttcccatctgtat
gatgagtttccttccagggatgcattcgaggctgcctgtgattttgcacgagaatatggc
ggtttgctatgggaagattcagtaaagatgcgtcttattgtgaacgctgaaagttatgat
cacatgaaaagatttcttcgtcagaagcaatag
DBGET
integrated database retrieval system
