Apium graveolens (celery): 141692990
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Entry
141692990 CDS
T11340
Name
(RefSeq) putative pectate lyase 20
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv00040
Pentose and glucuronate interconversions
agrv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
141692990
Enzymes [BR:
agrv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
141692990
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Peptidase_C24
Motif
Other DBs
NCBI-GeneID:
141692990
NCBI-ProteinID:
XP_074354070
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All DBs
Position
10:complement(135160240..135164890)
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AA seq
438 aa
AA seq
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MVLSLRLLYVFCMLLLLSYAKAGMLGDDEHLVSSDEETMELQSLSNTTMEVHKHEHAVED
PEAIATMVDMAIKNSTERRKLGFFSCGTGNPIDDCWRCDRKWARNRKRLANCAIGFGRSA
IGGRDGKYYVVTDPNDDDPVNPRPGTLRHAVIQDKPLWIVFKRSMVITLKQELIMNSFKT
IDARGHDVHIANGACITIQFVTNIIIHGLNIHDCRPTGNAMVRSSPSHYGWRTMADGDAI
SIFGSSHIWVDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDTYSRDKVM
QVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNRYLAPSN
PFAKEVTKRVDLNTHRWRHWNWRSEGDLMLNGAYFTPSGAGASASYARASSLGAKSSSMV
GTLTSNAGALICRRGRQC
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggtgctctcattgagattgctctacgttttttgcatgcttctgctgctttcctatgcc
aaggctgggatgttaggtgatgatgagcatctagtatcaagtgatgaagaaacgatggag
ctgcagagcttaagcaacacaacaatggaagttcataagcatgagcatgctgtggaagat
cctgaagcaatagcaaccatggtcgacatggcaattaagaatagcactgaaaggaggaag
ttaggatttttctcatgtggtacaggaaaccctattgatgattgctggcgatgtgatcgc
aaatgggcacgtaaccgtaagcgccttgccaactgtgccattggcttcggacgcagtgct
attggtggtcgtgatggcaagtactatgtggtcacagacccaaatgatgatgaccccgta
aaccccagaccaggaactctgcgtcatgctgtgatccaagacaagcctctatggatcgtt
tttaagcgtagcatggtgatcactctaaaacaagagctaattatgaacagctttaaaact
attgatgcccgaggacacgatgtccatattgcaaatggagcttgcattactatccaattt
gtcaccaatatcattattcatggtcttaacatccatgattgtagaccaactggcaatgcc
atggttagaagctcaccaagtcattatggctggaggacaatggccgatggtgatgctatt
tccattttcggatcaagccacatttgggttgatcacaattctctttccaactgtgctgat
ggcctaatcgatgctataatgggatcgactgcaattactatttctaacaattacttcact
caccataatgaggtgatgctattaggccatagcgacacctactcaagagataaggttatg
caggttacaattgcttacaaccattttggtgagggtcttattcagagaatgccaaggtgt
aggcatggatactttcatgtggtgaacaatgactatacccactgggaaatgtatgctatt
ggaggcagtgctgatcctacaataaacagccagggaaatagatatcttgccccatcaaac
ccctttgctaaagaggtgaccaagagagttgatctcaatacgcacagatggaggcactgg
aattggagatcagaaggagacctaatgcttaatggagcttattttactccatcaggagct
ggagcttcagcaagctatgccagggcctcaagtttgggcgcaaagtcctcttccatggtg
ggaactcttacctctaatgctggtgctcttatctgtcgtagaggccgccaatgttaa
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