Apium graveolens (celery): 141693011
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Entry
141693011 CDS
T11340
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 17
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
agrv Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
agrv01009
]
141693011
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
agrv03009
]
141693011
Enzymes [BR:
agrv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141693011
Protein phosphatases and associated proteins [BR:
agrv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141693011
Ribosome biogenesis [BR:
agrv03009
]
Eukaryotic type
Pre-60S particles
Helicases
141693011
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SLFN-g3_helicase
AAA_19
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
141693011
NCBI-ProteinID:
XP_074354093
LinkDB
All DBs
Position
10:180921778..180931184
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AA seq
587 aa
AA seq
DB search
MSKSTKMEGKNTTEVAQDDKVFASCTFETLGLHPRLCQILNEKLEFKVPTHIQAQAVPVI
LSGKHALVNAATGTGKTLVYLATVVHHLLLQNDKQRINRSDGTYALVLVPTHELCMQVYE
TLDKMLHPLHWLVPGYIMGGENRAKEKARLRKGISILVSTPGRLLDHLKNTSSFVYTNLR
WLIFDEADRILELGYGKEIEEILTVLGSRQGKSAVQRQNLLLSATLNDKVNHLANISLEN
PVTIGLDDKKTQIKPLCTNVLSLEGGVENASDGPGKLTNSSNGEYNVPAQLIQRYVKVSC
GSRLVVLVSILKKLFEGSGLQKIVVFFSTCDAVDFHHLLLSEFQWPPNSSSEAESRLFLE
CKTYKLHGNMDHAERRSAFNEFKSEKSALLLSTDVSARGLDFPRVRCIIQYDSPGEATEY
VHRVGRTARLGERGDSLLFLQPVEIDYLDLLKRHGVLLTEYPLLKLLDSMPFYGRNPNVK
KVLSLEMHHWVLSLQKALESFVITEPSVKKLAMSAFCSWVRAYSAHRGELKSIFVVKKLH
LGHVAKSFALKEQPSLVGKSFQKQLKKRNRDQKQKGGSKRRRIVGKS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaagcacaaaaatggagggaaaaaacacaacagaagtagctcaagatgacaaa
gtctttgcttcttgcacttttgaaactcttggtcttcatcccagactgtgtcaaattcta
aacgagaaattggagtttaaggttcctacacatattcaagctcaggctgttcctgttata
ctttccgggaagcacgcgcttgttaatgcggctactgggactggcaagactttggtttat
ttagcgacggttgttcatcatttgttgttgcaaaatgataaacagaggattaatcgttcc
gatggtacctacgcgttggttcttgtaccaacacatgagctgtgcatgcaggtgtatgaa
accttggataagatgttgcaccctctacattggcttgttccaggttatatcatgggtggt
gaaaatagggctaaagagaaagctaggctgcgcaaaggtatatctattcttgtttcaact
cctggacgtcttttggatcatttgaagaatacatcatcatttgtgtacacgaatttgcgc
tggctaatatttgatgaagcggataggattttggaactaggatatggtaaggagatagaa
gaaatactcactgttttgggttcaagacaaggcaagtcagctgtacagaggcaaaatttg
ctattatcagccaccttgaacgataaagtaaatcatcttgccaatattagtttagaaaat
ccagttacaattggtcttgatgataaaaagacgcaaataaagccattgtgcacgaatgtt
ctctctctagagggtggagtggaaaatgcatcagatggtcctggaaaattgacaaactca
tcaaatggagaatataatgtgccagcccaattaattcagagatatgtaaaagtgtcttgt
ggttctcggcttgtggtacttgtgtctattctgaaaaagctatttgagggatctggtttg
caaaagattgtcgttttcttctcaacgtgtgatgcagtagattttcatcatctcctgctt
agtgaatttcagtggccaccaaattcatcgtcagaagcagaatctaggctctttttggaa
tgcaaaacttataagttacatggaaacatggatcatgcggagcgcagaagtgcgttcaat
gaatttaaatcagagaaatcagctcttctattgtctacagatgtctctgcaagaggcttg
gatttccccagagttaggtgcattatacagtatgattccccgggggaggcaacagaatac
gtccacagggtcggaagaactgctcggctaggtgaaaggggagattctttattattttta
cagccagtcgaaattgattatttggatttgctgaaaagacatggcgtgctgctaacagag
tatcctcttctcaagttgttggacagcatgccattttatggtcggaatccgaatgtcaag
aaggttttatcattggagatgcaccattgggtgctttcactgcagaaagcactggaatcc
ttcgtcataacagagccaagcgtgaagaaacttgcaatgagtgctttttgctcttgggtg
cgagcatacagtgctcatcgtggtgagctaaaaagtatttttgtggtaaagaaacttcat
ttgggccatgtggcaaaaagttttgcgttgaaagaacaaccatctttggtgggaaagtcc
ttccagaagcaattgaagaagagaaaccgagaccagaaacagaaaggaggatcaaagagg
agacgtattgttggtaaatcataa
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