Apium graveolens (celery): 141695123
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Entry
141695123 CDS
T11340
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
agrv Apium graveolens (celery)
Pathway
agrv04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
141695123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
agrv04121
]
141695123
Ubiquitin system [BR:
agrv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
141695123
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
DUF7885
LRR_4
F-box-like
LRR_14
F-box
LRR_8
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
141695123
NCBI-ProteinID:
XP_074355481
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Position
11:907244..910859
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AA seq
583 aa
AA seq
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MAYSFPEEVLEYVLSFIKSDKDRNAVSLVCKSWYEIERWCRKRVFIGNCYAVSPMIMIRR
FPEIRSVEIKGKPHFADFNLVPEGWGGYFYPWVIAMSKAYPMLEAIRLKRMVVSDECLEM
IAKSFKNFRVLVLSSCEGFSTDGLASIAANCRNLRELDLRESEVEDLSGHWLSHFPDTCT
SLVSLNIACLGSEVCFSSLERLVSRCPNLRKLQLNRTVPLEKLPNLLCRAPQLVELGTGA
YSAELRPESLSNLVNAFTGCKKLKALSGFWDVVPLYLPAIYPVCCGLTSLNLSYANIQSP
DIIKLVSQCQNLQRLWVLDYIEDSGLDVLASCCKNLEELRVFPSDPYELEPNVPLTEQGL
VSVSEGCPKLHSVLFFCRRMSNAALVTIARNSPNLIRFRLCILEARAPDYLTNEPLDAGF
GAIVENCRKLRRLSLSGFLTDRVFEYIGKHAKKLEMLSIAFAGDGDMGLHHVLSGCDSLR
KLEIRDSPFGDQALLANAAKLETMRSLWMSSCSVSYGACKLLGQKLRRLNIEVIDERGTP
ESRPESCPIEKIYIYRTLSGPRFDTPNFIWTMDEEGNSPLGIA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcatattcatttccagaagaagtgttagaatacgtgttgtcgtttataaagtccgat
aaggatcgaaatgctgtttcattagtgtgtaaatcttggtacgagattgagaggtggtgt
aggaagagggtttttatagggaattgttatgcggtgagtccaatgattatgattaggagg
tttccggagattaggtcagtggagattaaggggaagccacattttgcggattttaatttg
gttccggaagggtggggagggtatttttatccgtgggtcattgcgatgtctaaggcttat
ccaatgttggaggcgattaggttgaagaggatggttgtgagtgatgagtgtttggagatg
attgccaagagttttaagaattttagggtcttggttttgtcgtcttgtgaggggttttcg
acagatgggcttgcttctattgctgctaattgcaggaatttgagagaattggacttgcgt
gagagtgaagtggaagatttgagtggacattggttaagccactttcctgatacttgcaca
tcgttggtatcactaaacatagcttgcctaggttctgaggtgtgtttctcatccctagag
cgccttgtttctcggtgtcccaacctgagaaagcttcagctcaaccgtacggttcctctt
gagaagctacctaacctgctctgcagagctcctcaactagttgagttaggtacaggtgcg
tattcggcagaactcagaccagagtcactatcaaacttagtaaatgccttcacaggttgc
aagaaactaaaagctttgtctgggttttgggatgtggtaccgttatatcttccagctatt
tatccagtctgttgtggactcacatctttgaacctgagctatgctaatatccaaagtccg
gatattatcaagcttgttagccagtgtcagaatttgcagcgcttatgggtgttggattac
attgaagacagtggcctagatgtccttgcttcttgttgtaaaaatctggaggaattaagg
gtatttccctctgatccatatgagttggaaccaaatgtgcccttaacagaacaggggctt
gtctctgtttctgaaggctgccccaagctccactctgttctattcttctgccgccggatg
tcaaacgctgcactggttaccattgctaggaatagtccgaacctaattcgtttccgttta
tgtattcttgaagcccgtgctccagattacctaactaatgaaccgcttgatgctggtttt
ggcgccatagtggagaactgcagaaaactgcgaaggctttcgttgtcaggatttctcact
gatcgtgtgtttgagtacattggcaaacatgcaaagaaattagagatgctctctatagca
tttgctggagatggtgatatgggcctccatcatgtattgtctgggtgtgatagccttcgt
aagcttgagattagggactccccttttggagatcaggctctattggcgaatgctgcaaag
ctggagacaatgcgatccctttggatgtcttcttgctcggtgagttatggagcatgcaag
ctgctaggacagaagttgcgtaggctcaatattgaagtaatagatgagagaggaaccccc
gagtcgaggcctgaaagctgtcctattgagaaaatttatatttaccggacactctcaggg
ccaagatttgacacgcccaactttatttggactatggacgaagaaggcaattcaccattg
gggattgcatga
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