Apium graveolens (celery): 141696815
Help
Entry
141696815 CDS
T11340
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
agrv Apium graveolens (celery)
Pathway
agrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141696815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agrv03041
]
141696815
Spliceosome [BR:
agrv03041
]
Complex A
Other components
Complex A specific factors
141696815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
zf-CCHC
KH_12
eIF3g
KH_PNO1_2nd
RRM_10
RRM_7
RRM_5
PHD_4
Motif
Other DBs
NCBI-GeneID:
141696815
NCBI-ProteinID:
XP_074357042
LinkDB
All DBs
Position
11:complement(205778465..205781788)
Genome browser
AA seq
714 aa
AA seq
DB search
MDPTLPPSQTLTSPPIPTSPDLPPPPQSITATEHDNTTRNDNTTRTRRRSRWDPITEPNN
PEKKRKSRWAEEEPKQAFQLPDFMKDFTQGIENDPAIQALNSRLLEISQILQAGLQLDDR
PDNDRSPSPEPLYDNIGIRINTREFRARERLNRERQEIIALIIKRNPAFKPPADYRPPKL
YRKLGIPMREYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRFGQKRDLKF
DSSDNEDLHVLVEADNQESLDAAAGMVEKLLRPVDEGLNEHKRQQLKELAALNGTIRDDE
FCRLCGEAGHRQYACPSRLSTFKSEVLCKNCGDGGHPTIDCPLKGTAGKKMDDEYQNFLA
ELGGSVPESFTKQSTLLTIMGSDNSGSNPPPWANNNSSGSNGNSLHPGLGSIVPKIGKEI
DHTNLYIGYLPPTMEDDELIRLFQPFGDIVMAKVIKDRMTGQTKGYGFVKFSDVEQANQA
TASMNGHRLNGRAIAVRVAGIQPQPVVPPGPPAPPAPMYPGPNHGYGGYPSQQMQSGGSL
GIAPPGSYMGPPPPWRPPPPPYGAYPPPPPPGANYGPYQGQSMPPYAMQYPPMGQTTTQD
QNLANAESQQNYSAGMQSQTNPSASNNLYGNSQAGMPPNSQPTYPPSSAGYTSYYGVNPP
PPAVPQSSTDQQSFASAPWAANPPMPPAVPSADQNQQTTYGSDPEYEKFMAEMK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggaccccactctacccccctctcaaaccctaacttctcccccaattcccacctcacca
gatttacccccacccccacaaagcatcaccgctacggaacacgataacacgacacgaaac
gataacacgacacgaacacgacgcagaagccgatgggacccaataacagaacccaacaac
cccgaaaagaaaaggaagtccaggtgggcagaagaggagccaaaacaagcgtttcaatta
ccagacttcatgaaagacttcactcaaggtatcgaaaatgaccctgctattcaagctctt
aattctcgattactcgaaattagtcaaattttacaagctggtttgcaattagatgatcgc
cctgataatgatagatcaccttctcccgaacccttgtatgataatattggaattaggatt
aatacgagagagtttcgtgcgcgagagaggcttaatagggaaagacaggagataattgcg
ttgattattaagaggaatcccgcgtttaaaccgcctgcggattataggccaccgaagctt
tataggaaattggggattccgatgagggagtatccggggtataattttattgggttgatt
attgggccgagagggaatacgcagaagaggatggagaaggagacgggagcgaagattgtg
attagagggaaagggagtgttaaggaagggaggtttgggcagaagcgggatttgaaattt
gattcgtcggataatgaggatttgcatgttttggtagaagcggataatcaggagtcgctt
gatgcggcggcggggatggttgagaagttgttgaggccggttgatgaagggttgaatgaa
cataagaggcagcagttgaaggagctggccgcgttgaatgggacgattagggatgatgag
ttttgtaggttgtgtggtgaggcggggcataggcagtatgcgtgtccgtcgaggttgtca
acttttaagagtgaggtgttgtgtaagaattgtggggatggggggcatccaactattgat
tgtccgttgaaagggacagcggggaagaaaatggatgatgagtatcagaactttttggcg
gaattaggtgggagtgttccggaatcttttactaagcagagcacactattgactattatg
gggtccgacaattctggaagtaatcctcctccttgggcaaataataattcttctggaagt
aatggcaacagcttacatccaggtcttggaagtattgtacccaagatcggaaaagaaatc
gatcatacgaatttgtatattggttacttgcctccaactatggaagatgatgaactgatt
agattgtttcagcctttcggagatatagtaatggccaaggttattaaagatagaatgacc
ggacagactaaaggttatggttttgttaagttttctgatgttgagcaagctaatcaggca
actgctagcatgaatggtcatcgactaaatggaagagcaattgcagtacgagttgcagga
atacaaccccagcctgttgtcccccctggacctcctgctccacctgcgcctatgtaccct
ggtcccaaccacggatatggtggatacccatctcaacagatgcagtcaggtggttccctc
gggattgcaccacctggtagctacatgggtcctcctcctccttggaggcctcctccacct
ccgtatggtgcttaccctccaccacctccccctggagcaaactatggaccttaccagggt
caatccatgcccccttatgccatgcaataccctccaatgggacaaacaaccacccaggat
cagaacttggcaaatgctgaatcacagcaaaattattctgctgggatgcaatctcaaact
aacccatccgcatctaataatttgtatgggaactcacaagcaggaatgcccccaaactca
caaccaacttatcctccatcttcagcgggttacacttcttattatggagttaatcctcca
cctccggctgtaccgcaatcttcaactgaccaacagagttttgcgagtgctccatgggct
gctaaccccccaatgcctccggcagtcccttctgcagatcaaaatcagcagactacctac
ggatcagacccagagtatgaaaagttcatggctgagatgaaatga
DBGET
integrated database retrieval system
