KEGG   Apium graveolens (celery): 141697117
Entry
141697117         CDS       T11340                                 
Name
(RefSeq) histone deacetylase 19-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
agrv  Apium graveolens (celery)
Pathway
agrv03082  ATP-dependent chromatin remodeling
agrv03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:agrv00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    141697117
   03083 Polycomb repressive complex
    141697117
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:agrv03036]
    141697117
Enzymes [BR:agrv01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     141697117
Chromosome and associated proteins [BR:agrv03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     141697117
   HDAC complexes
    Sin3A-HDAC complex
     141697117
    BRAF-HDAC complex
     141697117
    REST complex
     141697117
    SHIP complex
     141697117
    MiDAC complex
     141697117
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     141697117
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    141697117
  Chromatin remodeling factors
   NuRD complex
    141697117
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 141697117
NCBI-ProteinID: XP_074357448
LinkDB
Position
11:20117741..20123562
AA seq 494 aa
METGGNSLSSGPDGVKRKVFYFYDPEVGNYYYGQGHPMKPHRMRMTHALLAHYGLLQNMH
VLKPIPARDKDLCRFHADDYVSFLRGITPETQQDQMRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGSCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYGSGKYYSLNVPLDDGI
DDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGTEIEDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSRAILDDIRAKLLDNLSKLQHAPSVPFQERPPDTDLPEADEDQYNDNERWDAETDMDV
DEQRMPLYGRVKRELLEPEHKDVAIVREGVDMNATFMEAVKVTKPNSASMDEKPNGSEQG
NSDQPSEEHSNMIL
NT seq 1485 nt   +upstreamnt  +downstreamnt
atggaaacaggaggaaattcattatcttctggcccagatggagtgaagaggaaagtgttt
tatttctatgatcccgaggttgggaattattattatggccaaggtcaccctatgaagccg
cacagaatgcgtatgactcatgctcttttggcccactatggtttgttgcaaaatatgcat
gttctcaagcccattccggctagagacaaggatctttgtaggtttcatgctgatgattac
gtttctttcttgaggggcattacccctgaaacacagcaagatcagatgaggcaactcaag
aggtttaatgttggtgaagactgccctgtgtttgatggtctctattccttctgtcaaact
tatgctggaggctcagtaggtggtgcagtgaaactaaatcatggatcttgtgatattgct
ataaactgggctggtggacttcatcatgctaagaaatgtgaggcctctggtttctgttac
gtgaatgacatagtgctggcaattttggaactcctgaaagtgcatgagagagtcttgtat
gttgacattgatatccatcacggtgatggtgttgaggaggcattttacactactgacagg
gtcatgactgtttcattccataaatttggagattattttccaggtacaggggacgtacga
gatattggatatggtagtggtaaatattattctcttaatgttccattagatgatggaatt
gatgacgagagctaccagtccttatttaaacctatcatgggtaaagtaatggaagtattc
aggcctggtgctgtggtattacagtgcggtgcggattccttatccggggacaggttaggc
tgttttaatctttcgatcaaaggtcatgcagagtgcgtgagatacatgagatcctttaat
gtcccactacttctactgggtggaggtggatacacaatacgaaatgttgctcgctgctgg
tgttatgagaccggagtggctcttggaacagagatagaggataagatgccacaacatgag
tactatgagtactttggtccagattacacacttcatgtagctccaagcaacatggaaaat
aagaactcacgtgcaatattggacgacataagagccaaactgctggataatctctcgaaa
cttcagcatgcaccaagtgttcctttccaggagcgaccgcctgatactgatctccccgag
gcagatgaagatcagtacaatgataatgaaaggtgggatgcagagactgacatggatgtc
gatgagcagcgtatgcctttgtatggaagagtgaaaagggaactccttgaacctgagcat
aaagatgtggccattgttagggaaggggtagacatgaatgcaacatttatggaagctgtg
aaggtcacaaaaccaaattccgcatcaatggacgaaaaacctaatgggtctgaacaagga
aactcagaccaaccatctgaggagcactcaaatatgatcttatag

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