KEGG   Apium graveolens (celery): 141697416
Entry
141697416         CDS       T11340                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
agrv  Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:agrv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:agrv03400]
    141697416
DNA repair and recombination proteins [BR:agrv03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    141697416
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_2 Prok-RING_4 DEAD zf-C3HC4_4 zf-RING_5 RING_XB3-XBAT31 ResIII zf-RING_4 zf-ANAPC11 MEIOC Baculo_IE-1 UBA_Rad5 SNX17-31_F2_FERM TackOD1
Other DBs
NCBI-GeneID: 141697416
NCBI-ProteinID: XP_074357894
LinkDB
Position
11:complement(168973400..168984241)
AA seq 1063 aa
MGNKVTDELVPMIRSIVGQDYSDMDIIRALHMSNNDCTAAINIILDTPKSKKPEIMAGKA
KAYDQTGGVHLKEDGNNVGKIGASVSNGGSKGVDGFRELEITTRKLKALDQTGGVHLGGD
GNNVVKDSAFVGSFGNKGLDGLSKCSSSSSDEWWFVGCSDVAGLSTCKGRSLKCGEEVNF
TFAPERKGTPRKFGGGRGRGGNASSEIVRFSSKACGEIGRIPNEWARCLLPLVRDKKIRI
EGSCKSAPAVLSLMDTIILSVSVYINSSMFHQRHQTSLKATGSSTDDSVIHPLPTMFRLL
GLDPFKKAEFTPDDLCIKSVPLSSKEKSDSPATLLHLNKFKNPSPNGEVVENEEPISDAD
LDNIVGAGDSSQLEEMDPPSTLQCELRPYQKQALYWMLQLEKGQYLDDAATTLHPCWDAY
RLADKRELVVYVNSFSGDATVELPSTLQMARGGILADAMGLGKTIMTISLLLAHSEKGGT
LGNESTSQSFNENIEADRSPPVKKAKKFPGFDKLGKQQLALRGGGNLIVCPMTLLGQWKE
EIEAHSQPGSLSIYLHYGQTRSKDSKLLARNDVVLTTYGVLASEFSAENAEDNGGLYSVR
WFRVVLDEAHTIKNSKSQISTAAAALIADRRWCLTGTPIQNNLEDIYSLLRFLRVEPWGS
WAWWNKLVQKPFEGGDERGLKLVQSILRPIMLRRTKFSTDREGRPILVLPPADTKVIHCA
FTEAEKDFYDALFKRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQ
EFSDLNKLAKRFLKGGSGLMEGEANEVPSRAYVQEVVEELRKGDEGECPICLEAFEDAVL
TPCAHRICRECLLASWQSRTSGLCPVCRKTVTKNDLITAPTSSRFQIDIEKNWVESSKVS
TLLSELENLRSSGSKSIVFSQWTAFLDLLQIPLSRSKFSFVRLDGTLNQQQREKVLKQFS
EDSNILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTNSVNIRRF
IVKGTVEERMEAVQARKQRMISGALTDQEVRSARLEELKMLFT
NT seq 3192 nt   +upstreamnt  +downstreamnt
atgggcaacaaagttacagacgaattagtaccaatgattaggtcaattgttggtcaagat
tactctgacatggacataattcgagctcttcatatgtcaaataatgattgtactgctgca
attaacatcattttagacacacccaagtcgaaaaaacccgaaattatggctggtaaagcc
aaggcatatgatcaaacaggtggtgtgcatttgaaggaagatgggaataatgtggggaaa
attggtgcttcggtgtcgaatggcgggagtaaaggtgtggatgggttcagagaactcgaa
attacgactaggaaattgaaggcattggatcaaacaggtggtgttcatttggggggagat
gggaataatgtggtgaaagatagtgcatttgtgggtagttttgggaataaagggttggat
gggttgagtaagtgttcgagtagtagtagtgatgagtggtggtttgtggggtgtagtgat
gttgcagggttgtcgacgtgtaaagggaggagtttgaagtgtggggaggaagtgaatttt
acatttgcaccggagaggaaggggacgccaagaaagtttggtggaggacgagggcgtggg
ggtaatgcttcttcggaaattgtgaggttttctagtaaagcttgtggggagattggtcgc
attccaaatgagtgggctagatgtcttttgccactggtaagagataagaagatacggatt
gagggttcttgcaaatctgctcctgccgtgttgagcttaatggatactattatcttgtct
gtcagtgtgtacataaatagttccatgtttcaccaaagacaccaaacttcactcaaggca
actggaagttcgactgacgactcagttatccaccctctaccaactatgttccgtttacta
ggattagatcccttcaaaaaggcggaatttactccagatgatttgtgtattaaaagcgtt
cctctaagttcaaaggagaagtctgacagtcctgccacactcttgcatctcaacaagttt
aagaatccatctccaaacggagaagtagttgaaaatgaggaacctatttctgacgcagat
ctggataatattgtcggggccggtgacagctctcaattggaggaaatggaccctccaagt
accctacaatgtgaacttcggccctatcaaaagcaggctctttattggatgcttcagcta
gaaaagggacaatatctggatgatgcagcaacaactcttcatccatgttgggatgcatat
cggcttgcagacaagagggagttggttgtttacgttaattcgttttctggcgatgctaca
gtagaattgccaagcacccttcagatggccagaggaggaattttagcagatgctatgggg
cttggtaagactatcatgaccatatcccttcttcttgctcactcagaaaaaggtggaaca
ctgggtaacgagtccacaagtcagtcttttaacgaaaatattgaagctgatcgatcacca
ccagttaagaaagcaaagaagtttccaggatttgataaacttggtaaacaacaattagcc
ctcaggggtggaggaaatctcattgtatgtcctatgactcttttaggacaatggaaggaa
gagattgaagctcattcacaacccgggtctttgtctatatatcttcattatggacaaact
agatcaaaggattcaaagcttttagcgcggaatgatgttgtactaacaacttatggagta
ttagcatcggagttttcagcagagaatgctgaagataatgggggactttactcggtgaga
tggtttagggttgtgcttgatgaagctcacaccataaaaaattctaagagccaaatttct
actgccgcagctgcacttattgctgataggcgctggtgtcttaccggtactcctatacag
aacaacttggaggatatctacagtcttcttcgctttctgagggtcgaaccttggggaagc
tgggcctggtggaataagcttgttcaaaaaccttttgaaggaggtgatgaaagagggtta
aagttggtccaatctatcttacgcccaatcatgttgagaagaacaaaatttagcaccgac
cgagaaggcaggcctattttagttcttccgccagcggatacaaaggttatccattgtgca
tttacagaagctgaaaaggacttctatgatgctttgtttaaacgatcaaaggtgaagttt
gatcaatttgttgagcaagggcgagttcttcataactatgcttcaattttggagctactt
ctgcgtctacgccaatgttgtgaccatccatttcttgtgatgagccgaggtgatactcaa
gaattttctgacctgaataagcttgccaaacgcttccttaagggtggttcaggcctgatg
gaaggggaagcaaacgaggtgccttcacgggcttatgttcaggaagttgtagaagagtta
cgcaagggggacgagggagaatgtcctatatgccttgaagcttttgaggatgcagtgttg
acaccctgtgctcatcgtatatgtcgagaatgtttgttggcaagttggcaatctcgtaca
tctggtctttgtcctgtttgtagaaagaccgtcaccaagaatgatctaataacagcacca
acttcgagtcggttccagattgatattgagaaaaattgggtggagtcttcaaaagtttct
actctgttgagtgaactagaaaatcttcgctcatctggctccaaaagcattgttttcagt
cagtggacagcctttctagatcttttgcagatccctctttctcggagcaaattttcattt
gttcgtttggatgggactcttaaccagcagcaacgtgagaaagtcttaaagcagttttct
gaagatagcaatattctggtcctgcttatgtcgttgaaggctggtggagttggaattaac
ctgacagcagcatctaatgcctttgtcatggatccatggtggaatccagctgtggaagaa
caagctgtgatgcgaattcatcggattggacaaacaaatagtgtgaatatcagacgattc
attgtaaagggaacagttgaggaaagaatggaagcagtgcaagcacgtaagcagcgaatg
atatccggagccttaactgatcaggaagttcggtctgcacgtctagaagaacttaaaatg
cttttcacttag

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