Apium graveolens (celery): 141701248
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Entry
141701248 CDS
T11340
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
agrv Apium graveolens (celery)
Pathway
agrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141701248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agrv03041
]
141701248
Spliceosome [BR:
agrv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
141701248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
141701248
NCBI-ProteinID:
XP_074361032
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MNIMNMKEDLDNVSKLQKTQLYIDMMQKVKSALEKGSDSMQCDLLEDDPDYRLIIDCNAL
LVDIENEIIILNNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLQGVLPS
AIIMVVSITASTTSGKPLLDEDLVKTIEACDRALTLDSDKTKVLDFVQSRMSYIAPNLSA
ILGSAVAAKLIGTAGGLSALIEMPACNVQRLGAKRKNLAGFSTMTCQFPVGYMEQTEIFQ
STPPALRMRACRLLASKSILAARVDSTGGDATGGVGSAFREEICKKIDKWQQPYPAKQAR
PLHVPDSETKKKRGGRRLRKMKERYAISDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQ
AGSGKLRVSVGPNKLAAKCAKKFKERSFVSGATSGLTSSLAFTAVQGIELSNPQALANQL
GSGTQSTYFCKTGTFSKIKIP
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcatgaacatgaaagaagatttagataatgtatccaagctgcaaaaaacccag
ctttatattgatatgatgcagaaagttaaaagtgcacttgagaagggatccgactccatg
cagtgtgatctcttagaagacgatccagattaccgcctgattatagactgcaatgctttg
ttagttgatatcgagaatgaaattattatccttaataattttatccgtgataagtatcga
ctaaaatttcctgagcttgaatccctggttcatcatccgattgattatgctcgtgtggtg
aagaaaattgggaatgaagttgatctaacacttgttgatttacaaggagtactgccatcg
gctattattatggtggtttcaattacggcgtcgacaacaagtggcaagccacttctagat
gaagatctcgtcaagactattgaggcatgtgacagggcacttacattagattctgacaag
acaaaggttcttgattttgtacagagtaggatgtcatatattgctccaaacctttctgct
atacttggaagtgctgtcgctgcaaaattgattggaactgccggtggtttgtcagcactg
attgagatgccagcatgcaatgttcagcgtctaggtgccaagagaaagaatttagcagga
ttttcaaccatgacttgtcagtttcctgtaggttacatggagcaaacagaaattttccag
agcactccccctgctttaagaatgcgtgcttgtcgtctgttggcttcaaaatccattctt
gcagcacgtgtggactctactggaggagatgcaactgggggagtgggaagtgcttttcgc
gaggagatatgtaagaagattgataagtggcaacaaccatatcctgcaaagcaagcaaga
cctctccatgttcctgattctgagacgaaaaagaaaagaggtggtcgtagattaaggaag
atgaaagaaagatatgctataagcgacatgcgtaagctagccaacaggatgcagtttgga
gttccagaagagagctctctgggggatggtcttggggaaggatatggaatgcttggccag
gctggaagtggaaagttgcgggtgtcagttggtccaaacaagcttgctgctaagtgtgcc
aaaaaatttaaggagaggagctttgttagtggtgctacctccggactgacttcaagtctg
gccttcactgctgttcaggggattgagctctccaatccacaggcactagctaatcagctg
ggtagtggaacacaaagcacctacttctgtaaaacaggaactttttcgaagataaagata
ccttga
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