Apium graveolens (celery): 141706297
Help
Entry
141706297 CDS
T11340
Name
(RefSeq) RING-H2 finger protein ATL16-like
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
agrv Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
agrv04121
]
141706297
Enzymes [BR:
agrv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141706297
Ubiquitin system [BR:
agrv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141706297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
Prok-RING_4
Prok-RING_1
zf-RING_16
zf-RING_UBOX
zf_RING_Vps8_fungal
zf-RING_4
zf_RING_Vps8
zf-RING_Vps41
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
141706297
NCBI-ProteinID:
XP_074365193
LinkDB
All DBs
Position
2:270782961..270812810
Genome browser
AA seq
335 aa
AA seq
DB search
MNSVEFRDHKSHIKSLYNLTNQQNSTYQTSLLPSSGTGNGFPILALGVLGIMVTAFLLVA
YYIFVNKCCLNWQQIDPLSRFSVAQARTSEELLMAYFPSWQSRGLDDLLIREIPTMQYSK
SEGEGMSLYKCVVCLNEFQEEDTVKVLPSCKHGFHLDCIDIWLQSNDNCPLCRLSISGAT
RYPIDRIVAPTSSPQDPQPFITRGFVGSDENFVVLELGGEQNRNESRIHQRSPGKAQQKA
VKLKPGKFHHASIMGDECMNIRENDDQFSVQPIRRSFSMDSAAERHIYWSVEEITRQNRQ
QTEVRSNEECSSRVRRPFFTFGHLKVTLLKHGAMI
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgtagaatttcgcgatcataaatctcatatcaagagcctttacaatcttacg
aaccaacaaaattcaacttatcaaacttccctgctgcctagttcaggcacaggcaatggt
tttccaatactagctcttggagtactaggaatcatggtcaccgctttcttacttgtggcc
tactacatcttcgttaacaaatgctgcttaaactggcaacaaatcgaccccttgagtcgt
ttttcagtggcacaagcacggacaagtgaagaactattgatggcttactttccttcttgg
cagagccgggggctagatgacctcctgattcgagaaattccaactatgcagtatagtaaa
agtgaaggtgaagggatgagcttgtacaaatgtgtggtttgtttgaatgagtttcaagaa
gaagatacagttaaagtactccctagttgcaagcatggcttccatttggactgcattgac
atatggcttcaaagcaacgacaattgtccactttgtagattaagtatttcaggcgcaaca
cgatatccgattgacagaattgttgcaccaacgtcatcacctcaagatcctcagccattc
atcaccagaggatttgtgggaagcgatgaaaactttgttgtacttgaattaggtggagaa
caaaatagaaacgagtcaagaattcatcagcgttctccaggcaaagctcaacagaaggcc
gtgaagctgaaaccaggaaaatttcatcatgcatcaatcatgggagatgaatgtatgaac
atacgagagaatgatgatcagttctctgtacaacctattcggagatctttttccatggat
tctgcagctgagcggcatatttattggtcagttgaagagatcacaaggcagaatagacag
cagactgaggttagaagcaatgaggaatgtagcagtagggttcgacgaccctttttcaca
ttcggacatcttaaggtaacgctgctaaagcatggagccatgatataa
DBGET
integrated database retrieval system
