Apium graveolens (celery): 141706973
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Entry
141706973 CDS
T11340
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
agrv Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
agrv01002
]
141706973
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
agrv04121
]
141706973
Enzymes [BR:
agrv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
141706973
Peptidases and inhibitors [BR:
agrv01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
141706973
Ubiquitin system [BR:
agrv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
141706973
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141706973
NCBI-ProteinID:
XP_074365999
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Position
2:complement(12437103..12447035)
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AA seq
1136 aa
AA seq
DB search
MRVRGDLGFVSLVIVVVLVVVLRRKWRIVVSRREEIRRLLVLAAEESARVELEAKVEYSI
IGEAVEVVEEEKKKAGQNECALCFSPTKKLCSQCKAVYYCSGNCQIIHWRQIHKDECHQY
AMFSKSYEDKLHSQKVSNEDDHVSHGDSYELDRRKYAKQVTAFPEKYTHVGTPDVLHRKG
DMEGGVIAEDVESNSSDTSHFFDGSSESTITSSEASLDASVYSMNDSDGSNGIQNVAGIP
VKSDTACTNVDQNRSPFTEKSSSLEKSSIKFGQNTPVCSDGNCNCASCSSSGRNFGGSND
SLSDPATPSSGFWEGTIKSRRSTNDANDICNSSSLSELNVMLGSGSSVRVPTNLAKNNRP
PVHQGLKTKTMISDDGPTAFGTERHVSEAALSVKSCKDALNSRMSTSKISTSIHMDSGGG
LLDLKSRETKSSPSDYCAVLDATDKGHMVAQDFKSINNSSERSNKVGNDTIISSRASRSQ
NVGTIMCKNSDAGLTSSCRIDEDHKAKLSNVDDGVHRVTTCSPQLPTDSANAKHGLKSTM
LKVVDQLKPSKVSRHYSTGVGSEALGKYSLKQGLSPYEQFVKLYNWNKVEMQPCGLINCG
NSCYANAVLQCLAFTPPITAYLLQRLHSKTCQSKGWCFTCEFESLIVKAKEGNSPLSPII
ILSHIGNIGSHLNYGKEEDAHEFLRCAIDTMQSSCLKEATSKSPGSLNEETTLIGLTFGG
YLRSKIKCMKCGVKSERQERIMDLAVEIDGNICTLEEALRKFTGTEILDGENKYKCSRCK
SYEKAKKKLTIIEAPNVLTIALKRFQSGKFGKLSKSIKFPEVLNMTPFMSSKSDMSPIYR
LYGVVVHLDIMNASFSGHYVSYVKNIQNKWFKIDDSSVNDVELESVLTKGAYMLLYARCS
PRAPKLIRNSMVPRDPRKPKNLSLLSRSQSTGACDSPRTGHMNYQNSEGFFQDHPSYRRV
CSTLDDDSSSDNSSSIFSEACSCSTESSTKDSTSSDDFFDQIFSESRHNSRWNSSDSDTS
SSSSSPSPLYSKNIQTSSDHYATRYNKESLYAADHAEYAEDGHVWAKQPSKCSNVENMKG
KGSDPVLNSEKSKHCRKLDSNSNCSSCRETNLDKLGKPNLLNSVKSGMSLRRSSRG
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtgagaggggatctagggtttgtgtccctagtgattgtggtggttttggtggtg
gttttgaggaggaaatggagaattgtggtttcgagaagggaggagattaggaggttgttg
gttttggctgcggaggagtcggctagagtggagcttgaggctaaggtggagtattcgatt
atcggggaggctgtggaggttgttgaggaggagaaaaagaaggcggggcagaatgagtgt
gcactttgcttttcgcctactaagaagctttgttcccagtgtaaagcggtttattattgc
tctgggaattgtcaaattattcactggagacaaattcacaaagatgaatgccatcagtat
gccatgttcagtaagagctatgaagataaacttcatagtcagaaagtgtctaatgaagac
gatcatgtgagccatggtgatagctatgagttggatcggaggaaatatgctaagcaagtc
acagcgtttcctgaaaaatatacacatgtaggtacccctgatgttctgcacagaaagggt
gatatggagggcggagttattgccgaggatgtggaatcaaactcgtctgatacttctcat
ttttttgacgggagttctgaatcgactattacctccagtgaagcttcacttgatgcttct
gtctacagcatgaatgattctgatggatcaaatggaattcagaatgttgctggtatccca
gttaagtccgatactgcatgcacgaacgtggatcaaaacaggtcacctttcactgagaaa
tcatcctctctggagaagtcatccattaagtttggtcagaacacacctgtttgtagtgat
ggaaattgtaattgtgcatcctgcagttcatctggtcggaattttggtggttcaaatgat
tctctttctgatcctgccacaccctcttctggattctgggaaggaactatcaaatctagg
agatctacaaatgatgctaatgatatttgtaatagttccagtttaagtgaattgaacgtg
atgttaggttctggatcttctgtgagagttccaacgaacttggctaaaaataatagacct
cctgtgcaccaaggcttgaaaaccaaaacaatgataagtgatgatggtccaactgcattt
gggactgagaggcatgttagtgaagctgccttatcagtaaaatcatgtaaagatgcttta
aattccagaatgtcaacatcaaaaatatctacaagtatacacatggactctggtggtggt
ttgttggatctgaagtctagagagactaaatcttccccgagtgattattgtgctgtacta
gatgccactgataaagggcacatggtagctcaagattttaagagcattaataatagctcg
gaaagatcaaataaagtgggcaatgacacaattatttcttcacgtgcttcgagatctcag
aatgttggaactataatgtgcaagaattctgatgcgggcttgacatccagctgccgcata
gatgaagatcacaaggcaaagttgtcaaatgttgatgatggtgttcatagggttaccact
tgctccccccagttgccaactgattcagcaaatgctaaacatggtttaaaatcaactatg
ttgaaggttgttgaccagctcaagccttccaaagtttcaagacactattcaacgggggtt
ggtagtgaggctctgggaaaatacagtctcaagcagggtctatctccgtacgaacagttt
gttaagctttacaattggaataaagttgaaatgcaaccatgtggcctcataaattgtggg
aacagttgttatgcaaatgcggtgctccagtgcttggcatttacaccacctatcactgca
tatcttttgcaacggctccattccaagacatgtcaatctaaaggttggtgttttacctgt
gaattcgaaagtctaattgtgaaggcaaaggaaggcaattctccactatctccaattata
atactttcccatatcggaaacatagggagtcatcttaattatggtaaagaagaagatgca
catgagtttttaaggtgtgccattgatacaatgcaatcttcttgcctcaaggaagccacc
tcaaaaagcccaggctctttaaatgaagaaactactctcataggcctcacatttgggggt
tacctccggtccaagattaaatgcatgaaatgtggagtcaagtctgagcgccaagagaga
ataatggacctcgctgttgaaatagatggaaacatatgtaccctggaggaggctctacga
aagtttacgggtactgaaattcttgacggtgaaaacaagtacaagtgtagcagatgcaaa
tcttacgagaaagctaaaaagaagttgaccataatagaggctcctaatgtcctgaccatt
gcattgaagaggtttcagtcgggcaagttcggaaaacttagcaagtctataaagttcccg
gaggttttgaacatgaccccgtttatgagctcaaaaagtgatatgtctccaatatacagg
ctatatggagtggtcgttcacttggatatcatgaatgcctcgttttctggtcattatgta
agctatgttaaaaatattcaaaacaaatggttcaagattgatgatagttcggtgaatgat
gtggagcttgagagcgtcttgacgaaaggagcatatatgcttctttatgcaaggtgttct
ccacgggctccaaagttaataagaaactcaatggtaccccgtgatccaagaaaaccaaag
aatctatcattgttgtcaagatcccagtccacaggtgcatgtgactcccccagaacaggc
catatgaattatcagaacagtgagggcttttttcaagatcatccaagttaccgacgggtt
tgttccacactggatgacgattcgtcaagtgacaattcttcctctatattctccgaggct
tgttcatgcagtactgaaagcagcaccaaggattcaacaagctctgatgacttttttgat
caaatatttagtgaatctagacacaactcccggtggaattcatcagactccgacacttca
tcttcttcatcatctccctctcctctgtactccaaaaatatacaaaccagctcggatcat
tatgctacaagatataacaaagagagcctctatgcagctgatcatgcagaatatgctgag
gatggtcatgtttgggcaaagcaaccaagcaagtgtagcaatgttgaaaatatgaaaggt
aaaggaagtgaccccgtcttgaattctgaaaagagtaagcattgtagaaaattagatagt
aacagtaattgtagtagctgtagggaaactaacttagataaattaggaaagcccaacctt
ttgaatagtgtaaagtctgggatgtctctcagaagatctagtagaggatag
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