KEGG   Apium graveolens (celery): 141707120
Entry
141707120         CDS       T11340                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
agrv  Apium graveolens (celery)
Pathway
agrv03030  DNA replication
agrv03410  Base excision repair
agrv03420  Nucleotide excision repair
agrv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:agrv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    141707120
   03410 Base excision repair
    141707120
   03420 Nucleotide excision repair
    141707120
   03430 Mismatch repair
    141707120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:agrv03032]
    141707120
   03036 Chromosome and associated proteins [BR:agrv03036]
    141707120
   03400 DNA repair and recombination proteins [BR:agrv03400]
    141707120
DNA replication proteins [BR:agrv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    141707120
  DNA Replication Termination Factors
   ELG1-RFC complex
    141707120
Chromosome and associated proteins [BR:agrv03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    141707120
DNA repair and recombination proteins [BR:agrv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     141707120
  Check point factors
   HRAD17(Rad24)-RFC complex
    141707120
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 nSTAND_NTPase5 AAA_22 AAA_lid_RFC1 Mg_chelatase AAA_16 Viral_helicase1 Rad17 RuvB_N RCF1-5-like_lid AAA_5 AAA_11 AAA_24 AAA_25 nSTAND3 AAA_assoc_2 AAA_19 ABC_tran IstB_IS21 DNAX_ATPase_lid AAA_28 AAA_18 AAA_30 bpMoxR MeaB NTPase_1 RNA_helicase AAA_3 DO-GTPase1 AAA_7 UvrD-helicase
Other DBs
NCBI-GeneID: 141707120
NCBI-ProteinID: XP_074366221
LinkDB
Position
2
AA seq 335 aa
MASSSSSASMISQGYEMPWVEKFRPTKVCDIVGNEDAVSRLQVIARDGNMPNLILAGPPG
TGKTTSILALAHELLGANCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIII
LDEADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEIL
GRLMVVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATCSGFQFVNQENVFKVCDQPH
PLHVKNMIRNILEGKFDDACSGLKSLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKE
TGFAHMRICDGVGSYLQLCGLLAKFALVRDTAKAA
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggcgtcatcgtcgtcgtcagcatcgatgataagccagggatatgaaatgccatgggta
gagaagttcagaccaaccaaagtgtgcgatattgtcgggaatgaagacgccgtctctagg
ctccaagtcatcgctcgtgacggcaatatgcccaatctcatcctagctggccctcctggt
actggtaaaaccaccagtatattggctcttgcacatgagctgttgggagcaaactgcaag
gagggcgtgttggaactcaatgcatcagatgataggggcattgatgttgtgagaaacaag
attaagatgttcgcccaaaagaaggttactctgcctcctgggcggcacaaaatcattatc
ttggatgaagctgacagcatgacatctggagcacaacaagccctaaggaggacgatggag
atttactcaaactccacgcgctttgctcttgcttgcaacacttcctcgaagatcattgag
cctattcagagtagatgtgcccttgtaagattttcaaggttatcagatcaagagattctt
ggacgtcttatggtggttgttgcagcagagaaggttccctatgttccagaaggcctcgaa
gcaattatttttactgctgatggtgatatgagacaggcattgaataacttgcaagcaaca
tgtagtggattccagtttgtgaaccaagaaaacgttttcaaggtgtgtgaccagcctcat
cccttgcatgtaaagaacatgatccgcaatattctcgaggggaaatttgacgatgcctgt
tctggtctaaaaagtctctacgatcttggctattcacccactgacatcatcaccaccctt
tttcgaattataaagaactatgatatggcagaatacctcaaattggaattcatgaaggaa
actggttttgctcatatgagaatctgtgatggagttggttcatatcttcaactctgtggt
ctattggctaagtttgcattggtccgggacacggccaaagcagcataa

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