Apium graveolens (celery): 141707315
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Entry
141707315 CDS
T11340
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
agrv Apium graveolens (celery)
Pathway
agrv03030
DNA replication
agrv03410
Base excision repair
agrv03420
Nucleotide excision repair
agrv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141707315
03410 Base excision repair
141707315
03420 Nucleotide excision repair
141707315
03430 Mismatch repair
141707315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agrv03032
]
141707315
03036 Chromosome and associated proteins [BR:
agrv03036
]
141707315
03400 DNA repair and recombination proteins [BR:
agrv03400
]
141707315
DNA replication proteins [BR:
agrv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
141707315
DNA Replication Termination Factors
ELG1-RFC complex
141707315
Chromosome and associated proteins [BR:
agrv03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
141707315
DNA repair and recombination proteins [BR:
agrv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
141707315
Check point factors
HRAD17(Rad24)-RFC complex
141707315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_lid_RFC1
AAA_22
Rad17
RuvB_N
Mg_chelatase
AAA_14
SLFN-g3_helicase
AAA_16
AAA_11
AAA_5
AAA_assoc_2
AAA_2
AAA_24
nSTAND3
nSTAND_NTPase5
ResIII
AAA_19
PhoH
AAA_30
AAA_28
AAA_7
DNAX_ATPase_lid
DUF815
NPHP3_N
AAA_25
RNA_helicase
TIP49
bpMoxR
NB-ARC
AAA_17
AAA_18
Parvo_NS1
ATPase_2
Motif
Other DBs
NCBI-GeneID:
141707315
NCBI-ProteinID:
XP_074366506
LinkDB
All DBs
Position
2:39752144..39761410
Genome browser
AA seq
339 aa
AA seq
DB search
MAPLLQTSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL
AIAHELYGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGTQRHGNYPCPPYKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTDEIMND
RIEHICSAEGLNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSSISSRDLINVSGVIP
QEVVQALYSSCKSGNFELAEKEVNNAIAEGYPVSQMISQLFDLIVGLDDVSDEQKARIFK
KMGEADKCLIDGADEYLQLLDVASNAMRALCNMPLEFPS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgttgttgcagacctctcagccttgggtcgaaaaatatcgacctaagcaagtc
aaggacgttgctcaccaagacgaggtcgttcgtgtccttactaacactctcgaaaccgct
aattgcccgcatatgctgttttatggtccacctggaactggcaaaactactactgctctt
gccattgcacatgagctttacggacctgaactctacaagtccagggtgctggagcttaat
gctagtgacgaccgtggaataaatgtagtgcgcacaaaaataaaaaactttgctgctgta
gctgtaggtactcagcgtcacggaaactacccttgccccccttataaaataatcatcctt
gatgaggcagattccatgactgaagatgcccagaatgccttgcgtcggacaatggaaact
tactctaaagttacaagattttttttcatttgcaattatatcagcagaatcattgaacct
cttgcttctagatgcgcaaagttcagatttaagccacttactgatgaaataatgaatgac
cgtatagagcacatttgcagtgcagaaggtcttaatttggattcagaggctctttcgacc
ttgagttctatctctcaaggtgatctacgtcgggcaataacatacttgcagggagctgct
cgcttatttggatcttcaatctcatcgagagacttgattaatgtatctggggtcatccca
caggaagttgtgcaagctctatattcaagttgcaaaagtggcaactttgaattagcggag
aaggaagtcaataatgcaattgcagagggctatccagtttctcagatgatttctcagttg
tttgacctaattgttggactggatgatgtatcagatgaacagaaagcaagaatttttaag
aaaatgggcgaagcagataagtgtctcattgacggagcagacgagtacttgcagctgttg
gatgtggccagcaatgcaatgcgagcactatgtaatatgccactagaatttccttcttaa
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