KEGG   Apium graveolens (celery): 141707315
Entry
141707315         CDS       T11340                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
agrv  Apium graveolens (celery)
Pathway
agrv03030  DNA replication
agrv03410  Base excision repair
agrv03420  Nucleotide excision repair
agrv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:agrv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    141707315
   03410 Base excision repair
    141707315
   03420 Nucleotide excision repair
    141707315
   03430 Mismatch repair
    141707315
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:agrv03032]
    141707315
   03036 Chromosome and associated proteins [BR:agrv03036]
    141707315
   03400 DNA repair and recombination proteins [BR:agrv03400]
    141707315
DNA replication proteins [BR:agrv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    141707315
  DNA Replication Termination Factors
   ELG1-RFC complex
    141707315
Chromosome and associated proteins [BR:agrv03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    141707315
DNA repair and recombination proteins [BR:agrv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     141707315
  Check point factors
   HRAD17(Rad24)-RFC complex
    141707315
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_lid_RFC1 AAA_22 Rad17 RuvB_N Mg_chelatase AAA_14 SLFN-g3_helicase AAA_16 AAA_11 AAA_5 AAA_assoc_2 AAA_2 AAA_24 nSTAND3 nSTAND_NTPase5 ResIII AAA_19 PhoH AAA_30 AAA_28 AAA_7 DNAX_ATPase_lid DUF815 NPHP3_N AAA_25 RNA_helicase TIP49 bpMoxR NB-ARC AAA_17 AAA_18 Parvo_NS1 ATPase_2
Other DBs
NCBI-GeneID: 141707315
NCBI-ProteinID: XP_074366506
LinkDB
Position
2:39752144..39761410
AA seq 339 aa
MAPLLQTSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL
AIAHELYGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGTQRHGNYPCPPYKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTDEIMND
RIEHICSAEGLNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSSISSRDLINVSGVIP
QEVVQALYSSCKSGNFELAEKEVNNAIAEGYPVSQMISQLFDLIVGLDDVSDEQKARIFK
KMGEADKCLIDGADEYLQLLDVASNAMRALCNMPLEFPS
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggcgccgttgttgcagacctctcagccttgggtcgaaaaatatcgacctaagcaagtc
aaggacgttgctcaccaagacgaggtcgttcgtgtccttactaacactctcgaaaccgct
aattgcccgcatatgctgttttatggtccacctggaactggcaaaactactactgctctt
gccattgcacatgagctttacggacctgaactctacaagtccagggtgctggagcttaat
gctagtgacgaccgtggaataaatgtagtgcgcacaaaaataaaaaactttgctgctgta
gctgtaggtactcagcgtcacggaaactacccttgccccccttataaaataatcatcctt
gatgaggcagattccatgactgaagatgcccagaatgccttgcgtcggacaatggaaact
tactctaaagttacaagattttttttcatttgcaattatatcagcagaatcattgaacct
cttgcttctagatgcgcaaagttcagatttaagccacttactgatgaaataatgaatgac
cgtatagagcacatttgcagtgcagaaggtcttaatttggattcagaggctctttcgacc
ttgagttctatctctcaaggtgatctacgtcgggcaataacatacttgcagggagctgct
cgcttatttggatcttcaatctcatcgagagacttgattaatgtatctggggtcatccca
caggaagttgtgcaagctctatattcaagttgcaaaagtggcaactttgaattagcggag
aaggaagtcaataatgcaattgcagagggctatccagtttctcagatgatttctcagttg
tttgacctaattgttggactggatgatgtatcagatgaacagaaagcaagaatttttaag
aaaatgggcgaagcagataagtgtctcattgacggagcagacgagtacttgcagctgttg
gatgtggccagcaatgcaatgcgagcactatgtaatatgccactagaatttccttcttaa

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