KEGG   Apium graveolens (celery): 141707649
Entry
141707649         CDS       T11340                                 
Name
(RefSeq) protein CHROMATIN REMODELING 8
  KO
K10841  DNA excision repair protein ERCC-6
Organism
agrv  Apium graveolens (celery)
Pathway
agrv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:agrv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    141707649
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:agrv03036]
    141707649
   03400 DNA repair and recombination proteins [BR:agrv03400]
    141707649
Chromosome and associated proteins [BR:agrv03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    141707649
DNA repair and recombination proteins [BR:agrv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Other TCR factor
      141707649
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C WHD_Rad26_CSB ResIII HDA2-3 WHD_SOWAH TFIIF_beta
Other DBs
NCBI-GeneID: 141707649
NCBI-ProteinID: XP_074367042
LinkDB
Position
2:91781517..91789582
AA seq 1210 aa
MKQEEEEHNAFLSSLGVTSANPEDIERDVLQQARSNAGGNSESGGTVDHKAIDTTENTDT
ISSLRHVELYNKLRAVNIEIDAVASTVEQIDFVKSDDHASDEVTGKEQSSSNPWSSDPIQ
QALASDRLRSLKKTQIQLEDELIKCKGKSADGNNYEKLLQDVVQEEPKRKRKEDPKLSGN
QKKRRKAVTFGDDDDFDSVLNAASVGFVETERDELVRKGILTPFHKLKGFERRIQETGPS
SKKYLPGDVDNTDDFASSSIARAARSISQAAEARPTTKLLDPEYLPKLDAATRPFQRLRA
PPRIPQSLRNAPEIDKDLRRKKKRPSPGKKWKKGTSREVSNLEEIEDLRTSSNEEDNQES
VDDEPSFVTLEGGLNIPETIFTKLFDYQKVGVQWLWELHCQKVGGIIGDEMGLGKTIQVL
AFLGALHSSNLYKPSIIVCPVTLLRQWKREAQKWYPAFHVEILHDSAHDSSTRKKPVESD
ESDYESESEVRVNSSRRNNKKWDTLISRVLKSDSGLLITTYEQLRLLGEKLLDIGWGYAV
LDEGHRIRNPNAEVTLVCKQLHTVHRIIMTGAPIQNKLSELWSLFDFVFPGKLGVLPIFE
AEFAVPISVGGYANASPLQVSTAYRCAVVLRDLIVPYLLRRMKADVNAQLTKKTEHVLFC
SLTSEQRSVYRAFLASAEVEQIFNGNRNSLYGIDVMRKICNHPDLLEREHSYGNPDYGNP
ERSGKMKVVAEVLKVWKQQGHRVLLFAQTQQMLDILESFLIACCYTYRRMDGITPVRQRM
TLIDEFNNSDEVFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQTK
DVTVFRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKSRDMKDLFILTDDGEHGF
TETSSIFSQLAEDVNVVGTHKNNDDNANVNKPTASNLSNDASEIGNDSNIKLSNKGKEKA
ENSGKETDEESNILQSLFDAHGIHSAVNHDLIMNANDGEKLKLEEQASQVAQRAAEALRQ
SRVIRSRESIAVPTWTGKSGAAGAPSSVRQKFGSTVNTQLVGSSRPSEGLLNSEGRKLSL
SAGAANGKALTSSELLARIRGNQERAAGDGIEQQFGQASSSTGRANFGNNSAVKSSNLSG
VQPEVLIRQICTFLQQRGGRTVSASIVQHFKDRIPSKDLPLFKNLLKEIATLEKNPSGSS
WVLKPEYKEE
NT seq 3633 nt   +upstreamnt  +downstreamnt
atgaaacaagaagaagaagaacataatgcgttcttgagtagtttgggtgtcacatctgcg
aaccccgaagatatcgagcgtgatgtactacaacaggcaagaagcaatgcggggggaaac
agtgaatccgggggaactgtggatcacaaagctattgatacaacagaaaacactgataca
atatcatctttgagacatgtggaactctataacaagttgagggctgtaaatattgaaata
gatgctgtcgcgtcaactgttgaacaaatagactttgtaaagagtgatgatcatgcttct
gatgaagtcactggaaaggaacaaagttcttctaatccttggtccagtgatccaattcag
caagctctggcttctgatagattaagaagcctgaagaagacacagattcaacttgaggac
gaactcatcaaatgtaagggcaaatcggctgacggtaataattatgagaagctgttacaa
gatgttgttcaggaagagccaaagcgtaagcgaaaagaagatccaaaattaagtgggaac
caaaagaagcgaaggaaggcagttacatttggcgatgacgatgactttgattcagtttta
aatgcagcatctgtaggctttgttgaaactgaaagggatgaattagttcgaaaaggaatt
ttaaccccctttcataagcttaagggttttgagcgtcgtatacaagaaacagggccatct
agtaagaaatacttgcctggggacgtagacaatacagatgattttgcttcctctagcata
gctagagctgctagatcaatatcacaggccgcagaagctcgcccaacaaccaagctttta
gatccggaatatctacctaaactggacgccgcaactcgtccttttcaaaggcttagagca
ccgccaagaatacctcagtctcttagaaatgcgcccgaaattgacaaagacttgagaagg
aaaaagaaaaggccttcacccggaaagaaatggaaaaagggaacttctcgagaagtttca
aatctagaagaaattgaagatttaagaacctctagtaatgaagaagataaccaagagtct
gtagacgatgaaccgtcatttgtgacacttgaaggtgggctaaatattccagagaccatt
ttcaccaaactttttgactaccaaaaggtgggggttcaatggctttgggaacttcattgc
cagaaagtaggtggaattattggagacgagatggggcttggtaaaaccattcaagtccta
gcttttcttggagcattgcattcaagtaatttgtacaaaccaagcatcattgtttgtcct
gtcactctattgcgtcaatggaagcgggaagcacaaaaatggtacccagcatttcatgtg
gaaatattacatgattccgctcatgactcttctaccaggaagaagccagtcgaatctgat
gagagtgattatgaaagtgagtctgaggtcagggtaaattcatctaggcggaacaacaaa
aaatgggatactttgataagtcgtgttttgaaatcagattctggattgttaattaccacc
tacgagcagctccggttgctaggggaaaaacttcttgatattggctggggttatgcagtt
cttgatgaaggccatagaatccgaaatccgaatgccgaagtgactctagtttgcaaacag
ctacataccgttcatcgtataataatgactggtgcaccgattcagaataagttgtctgaa
ctatggtctctgtttgattttgtattccctggaaaattgggtgtgcttcctatatttgaa
gctgaatttgcggttcccatatccgttggtggttatgctaatgcctcacctttgcaagta
tcaactgcctatagatgtgctgttgttttgcgtgatttaatcgtgccttacctcctccgg
cgtatgaaggctgatgtcaatgcccaactaacaaagaaaactgaacatgtactcttctgt
agcctcacttcagagcagcgatctgtgtatagggcatttcttgctagcgctgaggttgag
cagatctttaatgggaacaggaattctctttatggaattgatgtgatgcgaaagatctgc
aaccatcccgatctgcttgaaagggaacattcctatgggaaccctgactatggaaatcct
gagcgcagtggaaaaatgaaagttgttgctgaagttctcaaagtatggaagcagcaaggt
catcgtgttcttctgtttgctcaaactcaacaaatgcttgacattttggagagtttttta
attgcttgttgctatacataccgtagaatggatggcatcactcctgtaagacagagaatg
acattaatagatgaatttaacaattcagatgaagtcttcatcttcattttaacaactaag
gttggtggtctgggaacaaatcttacaggtgccaatagggtgataatatttgaccctgat
tggaatccttcaaccgatatgcaggccagggagcgtgcttggcgtattggtcagacaaaa
gatgtcacggtttttagattgataactcgtggaacaattgaagagaaggtgtatcaccgg
caaatttacaagcattttctcactaacaaaatattgaagaatccgcagcagaaaagattc
tttaaatcccgtgacatgaaggatctctttatacttactgacgatggagagcatggcttt
actgaaacctctagcatatttagccagctagctgaggatgttaatgttgtcgggactcat
aaaaacaacgacgataatgctaatgtgaacaaaccaactgcatcaaatctaagtaatgat
gctagtgagattggaaatgactcaaatatcaaattatccaataagggcaaagagaaagct
gaaaatagtggcaaagaaactgacgaggaatcaaatatcttacagtctctttttgatgct
catgggattcatagtgcggtgaaccatgatctaatcatgaatgctaacgatggagagaag
ctgaaactagaggaacaagcttctcaagttgcacagagagcagctgaagcattacgccag
tcacgggtaattagaagtcgggagagtatagctgtcccaacctggactgggaaatcagga
gctgctggggcaccatcatctgttcgtcaaaagtttgggtcaactgttaatactcagtta
gttggtagttctcggccttctgaaggattgctgaacagtgaagggagaaagttgagtctt
tccgctggagcagctaatggcaaagcattaacttcatccgagttgctggcgaggattaga
ggaaaccaagaaagagcagcgggtgatgggattgaacagcaatttggccaggcctcaagc
tctactggaagagcaaacttcggaaataatagtgctgtgaagtcatcaaacttgtctggg
gtacagccagaagtgttaatacgtcagatctgcacatttttacaacaaagaggtgggaga
accgtttcagcgagtatagtacagcatttcaaggacaggattccctccaaagaccttcct
ttattcaagaatcttttgaaggaaatcgccactttggagaaaaatcctagtggatcttct
tgggttcttaagccagagtataaggaggaataa

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