Apium graveolens (celery): 141707740
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Entry
141707740 CDS
T11340
Name
(RefSeq) uncharacterized protein LOC141707740 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
agrv Apium graveolens (celery)
Pathway
agrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141707740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agrv03021
]
141707740
03041 Spliceosome [BR:
agrv03041
]
141707740
03036 Chromosome and associated proteins [BR:
agrv03036
]
141707740
Transcription machinery [BR:
agrv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
141707740
Spliceosome [BR:
agrv03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
141707740
Complex B
141707740
Complex C
U2 SnRNP specific factors
141707740
Chromosome and associated proteins [BR:
agrv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
141707740
TFTC complex
141707740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
141707740
NCBI-ProteinID:
XP_074367182
LinkDB
All DBs
Position
2:108975224..108990730
Genome browser
AA seq
1387 aa
AA seq
DB search
MAVSEEESSSSSSSSSNYKSRSASGPHYLAKTVLRGTVVLQVLPAHFRSPSSNDVLLAKE
TSIELVIIDDDGAVQSVCEQPLFGIIKDIAVLRWNGNLHQQSLQMQGRDALVVISDSGKL
SILTFCSEMHRFSPLAQILLSSPGNSRHQIGRMLTIDSNGGFIAVGAYEFQVAFFKISIS
AGNDIIEKRKSYPSETEGDASASGLVSRISGTIWSMCFISRDLRLSCKEHNPVIAILLNR
RDSLVNELLLLEWNIEEDNIHVLSQYLEAGPLAHDITEVPELYGFVFLFRVGDILLMDLR
DAHNPCCVCRTSLFSLSIAVEELNDSEESCKVNSVEEECIFDVAASALLELGDRHKDKDD
DPMNIDSECGTANKTSCHVCSWSWEPRNMKNPRMVFSVDSGELYMVEIYSDFSGLKVNLS
DCLFKGLPSKALLWVEGGLLATFVEMGDGMVLKLEEGKLLYRNPIQNISPILDMSVVDYI
DEKHDQMFACCGMAPEGSLRIIQNGISVEKLLKTPPIYHGVTGTWTVKMKVNDSHHSLLV
LSFVEETRVLSVGVSFTDVTDSVGFRPDVCTLACGLVGDGLLVQIHQNAVTLCLPTTVVH
PEGIPLSSPVCSSWVPEKMSISLGAVGQNVIIVATSNPCLLYILSIRFLSAYRYEIYQLY
HVQLQNELSCISIPEKHSVRKPPTPHSSFPDSMFSVPVDIDIGNTFVIGTHKPSVEVVSF
VPDKGLKLVAIGTISLTNTMGTTISGCIPQDIRLVVVDRLYVLSGLRNGMLLRFEWPSAY
MMSSPESNIHSPYSSSSVPPSIAPFNRNSSSAVSSDKMKENSPVFLQLIAVRRIGITPAF
LIPLTDSLDADIITLSDRPWLLQTARHSLMYASISFQPSTHATPVCSAECPNGVLFVAEN
SLHLVEMVQSKRLNVQKFPLGGTPRKVLYHNESRLLLVMRNDLSNDSYSSDICYVDPLSG
SILSSFKLDPGETGKCMELVKVGHEHVLVIGTSLSAGPAIMASGEAESSSQGRLIVLSLE
HRQNSDSGSMTHGSKASSSSQRTSPFRDVTGYAAEQLSNSSMCSSPDENNFDGIKLEETE
AWSMKLCYSTKLSGMVLAVCPYLDRFFLASAGCVFYVCGFPNDNYQRVRRLAVARTRFMI
RTLTTHFTRIAVGDCRDGILFFSYHEDARKLEQLYCDPVQRLVADCMLMDADTAVVSDRK
GSVAVLSRPSHLEDNASPESNLALNCSYYMGEIAMSIRKGSLLYKLPADDAFRGCDVAST
VFNFSCNSILVSTLLGSIISFVPLSREEYEILEAVQTRLVVHPLTAPILGNDHNEFRSRE
SAATVPRILDGDMLAQFLELTSMQQEAVLSLPLGSPKTVMLTLKSSPPPITANQVVRILE
RVHYALN
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatcggaagaagaatcatcttcgtcgagcagcagttccagtaattataagtcc
cgatcggcgtcaggacctcactatctcgctaaaactgttctccgtggcaccgttgttctt
caggtccttcctgctcactttcgctctccttcttccaacgacgtccttctcgccaaggaa
acgtcgattgagttggttattatagatgatgacggtgctgtacaatctgtttgcgagcag
cctttgtttggtataattaaagatattgcggttttgaggtggaatgggaatcttcatcag
caaagtctgcagatgcaaggaagggatgctttggtcgttatttctgattctggaaagctc
tcaattcttacattttgcagtgaaatgcataggttttcccccctggcacaaattctactc
tcaagtcccggaaactcgaggcatcaaattggtaggatgctgactatagattccaatggt
ggttttattgcggttggtgcatatgaatttcaagtggccttcttcaaaatttcaatatcc
gcgggtaatgatatcattgaaaagagaaaatcttatccttctgaaactgaaggagatgca
agtgctagtggactagtttccaggattagtggtacaatatggagcatgtgctttatttcg
agagatctacgactatcatgtaaggagcacaaccctgtaatagccattcttctgaatagg
agagattcactagtcaatgaactgttgttgttggaatggaatattgaggaagacaatata
catgtattgtctcagtatttggaggctggacccctggcccatgacataactgaagttcct
gaattatatggattcgtgtttttgtttagggttggtgatattctcttaatggatcttaga
gatgctcacaatccatgttgtgtctgtagaacgagcttattttctctatccattgctgta
gaggagctcaatgattctgaggagtcgtgtaaagtaaatagtgttgaagaagaatgcata
tttgacgtggctgcctctgccttactggagcttggtgatagacataaagataaagatgac
gaccccatgaatatagacagtgaatgtgggactgccaataaaacctcctgccatgtgtgt
tcctggagctgggaaccaagaaatatgaaaaatccaaggatggttttcagtgtggattct
ggagagctatatatggttgagatttattctgatttttctggattaaaagttaacctatcc
gattgtctctttaaaggtcttccatccaaggcgcttttgtgggttgaaggtgggctgttg
gctacatttgtggagatgggtgatggaatggtactaaaactggaagaaggaaagttgctc
tatagaaatcctattcaaaatatatcaccaatattggatatgtcagttgtggactacatt
gatgagaaacatgatcaaatgtttgcttgctgtggaatggcacccgaggggtctttaaga
atcatccaaaatggtattagtgtagaaaaattattgaaaactcctcctatttatcatggt
gtaactggtacttggacagttaagatgaaagttaatgattctcatcattctttgctcgta
ctgtcattcgttgaagagacaagggtgctttctgttggtgtaagctttactgatgttact
gattcagttggtttccgacctgatgtctgcactctcgcttgtggtcttgttggggatggt
ttgcttgtgcagatccatcaaaatgcagtcacactttgtttgcctactacagttgtccac
cctgaaggtattccattgtcatctccagtttgcagttcctgggtccctgaaaaaatgagc
attagtcttggagcagttggacagaatgtaattattgtagctacatccaatccatgctta
ctatatattcttagcataaggtttttgtcagcttaccgttatgaaatatatcagttgtac
catgtacaattgcagaatgagttgtcctgtatttccattcctgaaaagcactctgtccga
aagcctccaactcctcactccagtttcccagacagtatgttttctgttccagttgacatt
gacataggtaatacttttgtaattgggactcataagccttcagttgaagttgtatccttt
gtaccagataaaggcttaaagttggttgctatcgggaccatttcactgacaaataccatg
ggcacaactataagtggctgtatcccacaagatataaggcttgtagtagttgatcgacta
tatgttctttcaggattgaggaatggaatgttacttaggtttgaatggccttctgcctat
atgatgtcctcacccgagtcaaacattcatagtccttacagtagttcgtctgtgcctcct
tcaattgcaccttttaacagaaattcctcaagtgctgtatcatctgataaaatgaaggag
aattctcctgtattcctgcagttaattgcagtacgccgcataggtattactcctgctttc
ttgattccactgacagattcccttgatgctgatataatcactcttagtgataggccttgg
ttattgcaaactgcaaggcatagcctcatgtatgcatccatctcatttcaaccttccacg
catgcaacccctgtatgttcggctgagtgccctaatggagttctgtttgttgcagagaac
agtcttcacttggtggagatggtccaaagtaagagactgaatgtacagaagtttcctctt
ggaggtactccaaggaaggttctataccataatgaaagcaggttgttacttgttatgagg
aacgatctgagcaatgactcttattcatcggatatatgctacgtggaccctctcagtggt
tcaattctgtcatcattcaaactcgaccctggggaaacgggaaaatgtatggagttggtg
aaggtcggacacgaacatgtgttggtaattggaactagtctttctgctggaccagcaata
atggccagtggtgaagccgaaagcagctcacagggacggttgatagtcctcagccttgag
catagacaaaattccgatagtggttctatgacacatggttcaaaggctagttcatcttct
cagagaacttcaccttttcgagacgtaactgggtatgctgctgaacagctgtcaaatagc
agtatgtgcagcagtccggatgaaaataactttgacggcatcaagcttgaagaaactgaa
gcttggagcatgaaattatgttattcaactaagttgtccggaatggtactcgcggtctgt
ccatatcttgatcgttttttcctggcctctgctggttgtgttttctatgtttgtggattc
ccaaatgataattaccaaagggtgagaagattagctgtcgctagaacacgatttatgata
cggactttgactacacattttacacgaattgctgttggtgattgcagagatggcattctc
ttcttctcataccatgaggacgcaagaaaactggagcaactttactgtgacccagtgcag
agactagttgctgattgcatgcttatggatgccgacactgctgttgtgtcagatcgcaaa
gggagtgttgctgttttgtcacgtccaagtcatttggaagataatgccagtcctgaaagc
aacttagctctgaattgttcctattatatgggtgagattgccatgagcatcaggaagggt
tcacttctgtacaaacttccagctgatgatgcattcaggggttgtgatgttgccagtaca
gtgttcaacttttcctgcaacagcatcctggtcagtacactgttgggaagcataataagc
tttgttcctctgtcgagggaggagtatgaaatcttagaagctgttcaaacccgtcttgtt
gttcacccactgacagcccctattttgggaaatgatcataacgaatttcgcagccgtgaa
agtgcggccactgtacccagaatacttgacggagatatgctagctcagtttttggaactt
acaagtatgcaacaagaggcggtgttgtcacttccacttggttcaccaaaaacagttatg
ctgactttgaagtcatctcctccaccaattacagctaatcaggtcgtgcgcatccttgaa
cgagttcattatgctctcaactga
DBGET
integrated database retrieval system
