Apium graveolens (celery): 141707771
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Entry
141707771 CDS
T11340
Name
(RefSeq) putative E3 ubiquitin ligase SUD1 isoform X1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
141707771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
agrv04121
]
141707771
Enzymes [BR:
agrv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141707771
Ubiquitin system [BR:
agrv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
141707771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
Motif
Other DBs
NCBI-GeneID:
141707771
NCBI-ProteinID:
XP_074367221
LinkDB
All DBs
Position
2:complement(115488333..115500597)
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AA seq
1074 aa
AA seq
DB search
MEIEPATATSSSQNESNINNRNISSKYDDDEDEDVCRICRNGGDADNPLRYPCACSGSIK
FVHQDCLLQWLNHSHARTCEVCKHPFSFSPVYATNAPMRLPVHEFLMGIAMKALHVLQFF
VRLSFVLSVWLLIIPFMTFWIWRLAFVRSFAEAHKLFVGHISTTAVLTDCLHGFLLSASI
VFIFLGATSLRDYFRHLREIGVQDGDRDVGDRNGAGVARGHPRQANRVDDVNGIDAGGAR
GVAGAGQLIRRNAENVAAQWEMQAGRLEAHMDQIFDGMDDADGAEDVPFDELIGMQGPVF
HLVENAFTVLASNMIFIGVVILVPFTLGRVIAYYLFWLLSSATNLVLAAVVSFTESTVSL
ANATMLKVLLAGINMTSNNHETLVNQVAEKMRSNASVLADLSNNGTAALSTDLLKGETHG
TSRFTTLAVGYMFIFSLVFFYLGLIALIRYVKGEPLAVGRFYGISTIVETVPSLFRQFLA
AMRHLLTMIKVAFLLVIELGVFPIMCGWWLDVCTVRMCGKSIAERVDFFSVSPLASSVIH
WIVGIVYMLQISLFVSLLRGVLRNGVLYFLRDPADPNYNPFRDLIDDPVHKHARRLLLSV
AVYGSLIVMLVYLPAKLAMQVAPSIFPLDMSVYDPFTEVPAVLLLFQICIPFAIKHFKLR
TTIKSLLRYWFTSVGCVLSLTDFLLPAPEVNSVQENRNAQPLRQGGQQPQLGGQPALEGL
DPHALNSNRNSEASANIADEYDNDEESDAEYSFVLRIVLLLLMAWMTLLVFNSALVVIPV
SLGRVLFNAIPTLPVTHGIKSNDLYSFVIGSYVICTAVAGARYTNEYIITRRTADLLNYI
WKWCGILLKSSALLSIWVFVIPVLIGLLFELLVIAPMRVPVDESPIFLLYQDWALGLIFL
KIWTRLVMLDHMIPLADESWRVKFERVRENGFSRLQGFWVLREIVIPVIMKLLTALCVPY
VLARGVFPIFGYPVVVNSAVYRFAWLGCLVLGLVCFCAKRFHVCFTNLHNSIRDDIYLIG
RRLHNFREEKDVRQIVAAVDLAKPDPNMEDGGSLHNGEGADAVLRQRHVIGQDV
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgaaccagcgacggcaacatcttcatcacaaaacgagagtaatatcaataac
aggaatatttcgagcaagtatgatgatgatgaagacgaagatgtctgtagaatctgtcga
aacggaggcgacgctgataatcctcttcgatatccttgcgcttgtagtggaagtatcaaa
tttgttcatcaggattgtcttcttcagtggcttaatcatagtcatgctcgtacttgcgag
gtctgcaaacatcctttttcattttccccagtttatgccacaaatgctccgatgaggctt
cctgttcacgagtttttgatgggaatagctatgaaagcattgcatgttctgcaattcttt
gtgcggcttagctttgtactttccgtgtggcttctgattataccatttatgacgttttgg
atctggcgattggcatttgttaggagtttcgctgaggcacataaactctttgtaggccat
atctctaccacagctgttcttactgattgtctacatgggttcttactctctgctagtata
gtgtttatttttcttggggccacttctctgagggattactttagacatttacgagaaatt
ggagtgcaggatggtgacagagatgttggagatagaaatggtgccggtgttgctagagga
caccctagacaagccaatagagttgatgatgttaatggaatagatgctggtggagcacga
ggtgttgctggtgctggtcagttgattagacggaatgctgaaaatgttgcggctcagtgg
gagatgcaggcaggccgccttgaggctcatatggatcagatttttgatggtatggatgat
gctgatggtgcagaagatgtgccttttgacgagttaatcggcatgcaagggcccgtcttt
catttggtagaaaatgcatttacagttcttgctagcaatatgatatttattggtgttgtc
atacttgtgccctttactttgggaagggttattgcctactacttgttttggctcttgtcc
tccgctaccaatctggtgctggcagctgttgtttcatttacagaatctactgtttctctg
gccaatgccactatgttgaaggtattacttgcaggcataaatatgacatccaataaccat
gaaactctggtgaaccaagttgcagaaaaaatgcgatcaaatgcaagtgttctagctgac
ctgtcgaacaatggtaccgcagcgctttctactgatctcttgaaaggggaaactcatggc
acttcacggtttacaacccttgcagttggctatatgtttatcttctcattagtctttttc
tatctcgggttgattgcattaatacggtatgtcaaaggagagcctttggctgtgggccgg
ttctatggtatttcaacaattgtcgagacagttccatcgttgttcaggcagttcttggca
gcaatgagacatttgcttactatgattaaagttgcatttctccttgtaattgaacttggt
gtttttcctattatgtgtggttggtggctggatgtttgtactgtaaggatgtgtgggaag
tcgattgcagagagagtagatttcttttcagtttctcctttggccagctcagtcattcat
tggattgtagggattgtctatatgctacaaataagcctctttgtcagccttcttcgaggg
gtattgcgaaacggcgttctttacttccttcgagatccagctgatcctaattataatcca
tttcgcgatctgattgatgaccctgttcacaagcatgctcgtagattgcttttatctgtt
gcggtttatggtagtctcattgtgatgcttgtttatttacctgccaaacttgcgatgcaa
gttgctccttccatctttcctcttgatatgtctgtgtatgacccatttaccgaagttcct
gctgttctgcttctgtttcaaatctgcattccattcgctatcaaacatttcaagctccga
acaacaataaagtcacttcttagatattggttcacctctgtaggctgcgtgcttagtctg
acagactttttattacctgcacctgaggttaatagtgtccaggaaaatagaaacgctcaa
cctttaaggcagggtggacagcaaccacagctaggtggacaacctgccttagaaggcctt
gatccacatgctcttaacagcaataggaattcagaagctagtgctaatattgcagatgag
tacgataacgatgaggaatctgatgcagagtacagctttgtgcttcgcattgtgcttctt
ttgttgatggcctggatgactcttcttgtattcaactctgctttggtggtcatacccgtt
tcgcttggacgagtactctttaatgctatccccactttgccggtaacccatggaatcaag
tctaatgatttgtattcatttgtcatcggtagctatgtcatttgtactgccgtagctgga
gcaaggtataccaatgagtacatcataactaggagaactgcagatctgttaaactatata
tggaagtggtgtggtattcttctgaagagctctgctttgttgtcaatttgggtttttgtc
attccagttttgattggattgctctttgagcttctggttattgcgccaatgcgggtacct
gtggatgagagccctatatttcttttgtatcaggattgggctttgggtctcatctttctc
aagatctggaccagactggtaatgctggaccatatgatacccctggcagatgagagctgg
agagtaaaatttgagagggtaagagaaaatgggttttccaggctgcagggattctgggtt
ctacgggagattgtgatccctgtcataatgaagctgctgactgcgctatgtgttccctat
gtgttagccagaggagtgtttccaatttttgggtatccagtagtagttaattcggctgta
tacagatttgcctggttgggatgcttagtcttgggtttggtgtgcttttgtgccaagagg
ttccatgtttgtttcaccaacctccacaactcaatacgtgatgatatttatttaatcggt
cgtaggctgcacaactttcgagaagaaaaagatgtgaggcaaattgtggcagcggttgat
ttagcaaagcctgatcctaatatggaggacggtggatctttacataatggtgaaggagct
gatgcagtattgaggcagcgacatgttattggacaagatgtctga
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