Apium graveolens (celery): 141707866
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Entry
141707866 CDS
T11340
Name
(RefSeq) putative polyribonucleotide nucleotidyltransferase 1, chloroplastic
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141707866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141707866
03016 Transfer RNA biogenesis [BR:
agrv03016
]
141707866
Enzymes [BR:
agrv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
141707866
Messenger RNA biogenesis [BR:
agrv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
141707866
Transfer RNA biogenesis [BR:
agrv03016
]
Prokaryotic type
tRNA degradation factors
141707866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
S1_RRP5
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
141707866
NCBI-ProteinID:
XP_074367385
LinkDB
All DBs
Position
2:134210953..134225599
Genome browser
AA seq
966 aa
AA seq
DB search
MKKRRQDLKKTKRISQTESHSLHCFAALSVHGCFKPEMLMNSSFSSSFSSFCSSSCLYGR
PSPFLPHANRCKLTHFCPNTFLNSKPRNRLTPKRNSFRIRALDTSDVLQTTTDSPQRFSV
KIPVGDRHILVETGHMGRQASAAVTVTDGETIVYTTVCMSDVPGEPSDFFPLSVHYQERF
SAAGKTSGGFFKREGRAKDHEVLICRLIDRPLRPTMLKGFYHETQILSWVFSYDGLHSPD
SLAVTAAGIAVALSELPSSDVVAGVRIGLIGDKFIVNPTTKEMEQSKLDLLLAGTDSAIL
MIEGYCDFLPEEKLLQAVGVGQEAVRAICNEVKTLVKKCGKPKMLDAIRLPPPELYQFVE
EIAGDGLVKALQIKKKIPRRKALSSLEDNVLTILTEEGYVNKDETFVVSEPVPGVFEDED
EDEEVVVDGEVDEGDVHIKPVSRRPTPLLFSEVDVKLVFKEVTSKYLRKRIVEGGKRSDG
RSPDEIRVINSQCGLLPRAHGSALFTRGETQALAVATLGDKQMAQRIDNLVDLDDVKRFY
LQYCFPPSCVGEAGRMGAPSRREVGHGMLAERALEPILPSEDSFPYTVRVESTITESNGS
SSMASVCGGCLALQDAGVPVKGSIAGIAMGLVLDTKEFGGDGTPLILSDITGSEDASGDM
DFKVAGNEHGVTAFQMDIKVGGITLPIMKQALLQAKDGRKQILAEMSKCSPPPSKRLSEY
APLIHVMKVKASKVNLIIGSGGKKVKSIIEETGIEGIDTNDNGIVKITARDQACLEKAIT
IISSLTMVPAVGEIYRNCEIKSIAPYGAFVEIAPGREGLCHISELSADWLAKAEDAFKVG
DLVDVKLIEVNEKGQLRLSRKALLPDPDPENSEKNSTTSLNKDSSVSPKTPDKAKFKKAS
STGSLADANTEQPKEKGAYVRSISPTKSSDVKKSSGISKDRPYTKKGKIEDTGSGADQMA
SSQKGG
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacgaaggcaagacctaaagaaaacaaagcggataagtcagactgagtcacac
tccctccattgtttcgctgcactatccgtacatggttgtttcaaaccagaaatgttaatg
aattcttctttttcttcttctttttcttctttttgtagcagcagctgcttgtatggacgc
ccttccccattcctccctcacgcaaatcgatgcaaactcactcacttctgccccaacacc
tttctcaactccaaaccaagaaatagattaactccaaagcgtaatagctttagaattcgt
gctttagatacctccgatgttttgcaaactacgaccgactcgccgcagcgattttcggtt
aaaattcctgttggtgatcgtcatatattggtggagactggtcatatgggaagacaggca
agtgctgctgtcactgttacagacggagaaactattgtttacactactgtgtgcatgtct
gatgtaccaggtgaaccttctgacttcttccctctttctgtgcattatcaagagcgtttc
tcggcagctggaaaaactagtggaggatttttcaagcgcgaaggaagggcaaaagatcac
gaggtgctaatatgtagattgattgatagaccattgcgtccaaccatgctcaaaggattc
taccacgaaactcagatattatcgtgggtgttcagctatgacggtttacattctccagat
tctttggcagttacagcagcagggattgcagtcgctctatcggaattgccaagttcagat
gttgttgctggcgtccgaatcggtttgattggagataagtttatagtcaatccaacaacc
aaggaaatggaacagtcaaagctggatttattgctagcaggcactgacagtgcaatacta
atgatagagggttactgtgattttcttccagaagagaagttgcttcaagcagtaggagtg
gggcaggaggctgtacgagctatctgcaatgaggtgaaaacattggttaagaagtgtggg
aagcccaaaatgcttgatgcaatcagactaccccctcccgagctatatcaatttgtcgaa
gaaattgctggtgatgggttggtcaaagcacttcagatcaagaagaaaattccaagaaga
aaggccctatcatctctggaagataatgttttaactatacttacagaggagggttatgtg
aacaaggatgaaacttttgtagtttccgaaccggttcctggtgtatttgaggatgaagat
gaggacgaagaagtagttgtggacggggaagttgatgaaggagacgttcacatcaaacca
gtttcaagaagacccactcctttgctattctctgaggtagatgtgaagttggtgtttaag
gaagttacatccaaatacctgaggaaacgtatagtggagggaggaaaaagaagtgatggc
agatctccagatgaaatacgcgtaattaattcacaatgtggattacttcccagagcgcat
gggagtgctctctttacacgaggagaaacccaggcgttagcggtggccacacttggtgat
aaacagatggcacaaagaatagacaatcttgtggatctggacgatgtgaagaggttttat
cttcagtactgctttccgccatcatgtgttggagaagctggaaggatgggtgcaccaagc
agaagagaagttggtcatggtatgcttgcagagagagcccttgaacctatattgccctct
gaagattcatttccctacactgtacgtgtcgagagtaccataactgagagcaatggctca
tcaagtatggcatctgtttgtggaggatgtttagcattacaggatgcaggggttccagtt
aaaggctccattgctggtatagcaatgggtttggtcttagacacaaaggaatttgggggt
gatggtacccccctcatcctttcagacataactggatctgaagatgcctctggagatatg
gacttcaaggttgctgggaatgaacacggtgtaactgcatttcagatggatataaaggta
ggaggaattactttaccaattatgaagcaggctctcttacaagcaaaagatgggagaaag
cagattcttgctgagatgtccaaatgctcacctcctccttctaaaaggctatctgaatat
gccccacttattcatgttatgaaggtcaaagcatcgaaagtaaatctaatcattggttct
ggtggaaagaaggtgaagagtataattgaagaaaccggaattgaaggcattgacacaaat
gataatggaatagtaaaaataactgcaagagatcaggcttgcctcgagaaggcaataact
attattagtagtttgacgatggttccagctgtcggggagatttatagaaactgtgagatc
aaatctatagctccttatggagcctttgttgagatagcacctggcagagagggactttgc
catattagcgagttgagtgcagattggctggcgaaggcagaggatgctttcaaagtggga
gatcttgtcgatgttaagctcattgaggtaaatgaaaaaggacaacttcgtctaagccgg
aaggcacttctacctgatccagatccagagaattctgaaaaaaatagtacaaccagcttg
aacaaggatagttctgtgtcaccaaaaactcctgataaagctaaattcaagaaagcatca
agtactggtagtttggcagacgcaaacaccgaacaacccaaggaaaagggtgcttatgtt
aggtccataagcccaactaaaagcagtgatgtcaaaaagtcaagtggcatttccaaggat
agaccttatactaaaaaaggcaagatagaggatactggcagtggagcagatcaaatggcg
agcagccagaaaggtggttga
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