Apium graveolens (celery): 141708145
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Entry
141708145 CDS
T11340
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
agrv Apium graveolens (celery)
Pathway
agrv03013
Nucleocytoplasmic transport
agrv03015
mRNA surveillance pathway
agrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141708145
09122 Translation
03013 Nucleocytoplasmic transport
141708145
03015 mRNA surveillance pathway
141708145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141708145
03041 Spliceosome [BR:
agrv03041
]
141708145
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
141708145
Spliceosome [BR:
agrv03041
]
Common components
Common spliceosomal components
Cap binding complex
141708145
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
141708145
NCBI-ProteinID:
XP_074367725
LinkDB
All DBs
Position
2:229191424..229196634
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AA seq
254 aa
AA seq
DB search
MALLFKDPNKISAYRDRRFQGSQEEFENALLTSTTVYVGNMSFYTTEEQAYELFSRAGEI
KKIVMGLDKNTKTPCGFCFIMYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRELVDYGVGSLGSFPPVMPSNYGRNS
GRQGYGGSNRHGRGDYQRKRHREDDRFGPENTKRTLDHDSRRNSDHDSRPEKNPRFRESG
DSDEEEEDDRKRRP
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggccttactgttcaaggatccaaacaagatctctgcgtaccgggatagaaggtttcaa
ggctcgcaagaagaatttgagaatgctctcctcacctcaacaactgtttatgttggcaat
atgtcattctacacaactgaagaacaagcatatgaactgttctctcgagcaggagaaatc
aaaaaaatagttatgggattagataagaacactaaaactccttgcggtttttgctttatc
atgtactattctagagaggatactgaagatgctgttaaatacataagtgggacaatactt
gatgatcgtcctattcgtgtagattttgattggggatttcaagaaggaagacaatgggga
cgtggtcgtagtggtggccaggtacgcgatgaatatcgcaccgactatgatccaggcagg
ggtggttatggaaaattagttcagaaggagttggaagcacaaagggaactagtagattac
ggtgtagggtctctgggctcttttccacctgtcatgccttctaattatggtagaaacagt
ggaagacagggctacggtggctctaatcgacacggtagaggagattatcagcggaagcga
catcgggaagatgacaggttcgggccagagaacactaaaagaactttagatcatgattct
cgtagaaattctgatcacgactccagaccggaaaagaatccacgtttccgagagagtggt
gattctgacgaggaggaggaagatgatcgaaaaagacgcccttag
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