Apium graveolens (celery): 141708658
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Entry
141708658 CDS
T11340
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
agrv Apium graveolens (celery)
Pathway
agrv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
141708658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agrv03400
]
141708658
DNA repair and recombination proteins [BR:
agrv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
141708658
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
141708658
NCBI-ProteinID:
XP_074368499
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Position
2:305439841..305449161
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AA seq
1071 aa
AA seq
DB search
MHRQKSILSFLKKPDNDNITPSVAVSTTSEVRGTDTPPEKAPRQVISAKVGDICRGPSLF
ENIMHKFTKPTSSNRNNEKECSDNVHSVFKESGYSETPTALIGASGFSRKENFANTKTKT
VDGEAKGFPLCVESDDDILGPETPGTKPLVSRFKRIQEDTSNSVIKSDCSVHNTSKRVKF
LDEPVNNEKNHDDLREVTSKFEWLYPSKIKDANGRRPNNPSYDKRTLYIPPDAFRNMSAS
QKQYWTLKSQYMDVLMFFKVGKFYELYELDAEIGHKELDWKITLSGVGKCRQVGISENGI
DDAVQKLIARGYKVGMIEQVETSEQAKARGASSIIQRKLVQVVTPATNLNGNIGPDAVNL
LSIVEDNCGLDNGSTAYGFAFVDCAALKFWVGSFNDDSSYSALGTLLMQVSPKEIIYESH
GLSREAQKAVKKYSSTGSTICQITPVQTSTTSDDQFEVQSLINSKGYFKGFCNNLDYAFD
GIMHRDLSFRALGELITHLSRLMLNDALRNGDIIPYQLYKGCLRMDGQTLINLEIFSNTA
DGSSSGTLYNYLDKCITPSGKRLLRHWICHPLKDVQEISRRLNVVEEMMAQTDASSLVQH
LRKLPDLERLLGRIKSTVRSSALLMLPLIRSKILKQRVKEFGSLVKGLRVGLDLLKLLHT
GQHAISSFDKFLKLPELRGDNGIDKFLSQIEAAIDSDFPNYQDHNPNDSNPEILSILIEL
FSEKCTEWSEVIHAISCIDVLRSFAVISKFSPGVMCRPIILPLSEPMSLSDECKGPTLRL
KGLWHPFALGAHGGFPVPNDVHLGEDTYGYHPCTLLLTGPNMGGKSTLLRATCLAVILAQ
LGCYVPSETCVLSLVDIIFTRLGASDRIMTGESTFLIECTETASVLQNATQNSLVLLDEL
GRGTSTFDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEFASHPRVILQHMAFTFKSKS
EISAQGDKELVFLYRLTNGACPESYGMQVALNAGVPQPVVEAASKAGQVMKKMVGESFKL
SESRSEFSTLHEEWLKTLLAVSVPNENILDDNDAFDTLFCLWHEMKCSSKV
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgccagaaatcaatactctccttcctcaaaaaacccgataacgacaacatcaca
ccatccgtcgccgtttctactacttctgaagttcgaggcaccgatacgccgcctgagaag
gcgccacgtcaggttatctccgcaaaagtcggcgatatatgcagaggtccttctctgttt
gaaaatatcatgcataagttcactaagccaacctcctccaacagaaacaatgaaaaggaa
tgttccgataatgttcactcagtttttaaggaatccggttattcagaaactccgactgct
ctaattggagcttctggctttagtagaaaggaaaattttgcaaatactaaaactaaaacg
gttgatggggaggctaaaggctttccgttgtgtgtagaaagtgatgatgatattctcggg
ccagaaacaccaggcacgaaaccacttgtttcgcgtttcaagcggatacaggaggatact
agtaactctgtgattaaaagtgactgctccgtgcacaatactagtaaaagggtgaagttc
cttgacgaacctgtcaataatgaaaagaatcatgacgacctacgtgaagtgactagtaaa
tttgaatggctttatccatctaagataaaggatgctaatggaagacggcctaacaatcct
tcctatgacaagagaacactttatatccccccggatgctttcagaaacatgtcggcatct
caaaagcagtactggactttaaaaagtcaatatatggatgtcttgatgttctttaaagtg
gggaagttctacgaactgtatgaattagatgctgaaattggtcacaaagaacttgattgg
aaaatcacgctgagtggtgtaggcaaatgtcgacaggttggtatctccgagaatggaatt
gatgatgctgtgcaaaaattaattgctcgcgggtataaggttggtatgatcgagcaggta
gaaacatctgaacaagcaaaagccagaggtgcctcttctatcatccaaaggaaactagtt
caagttgtgactccagctaccaatttgaatggtaatattggccctgatgctgtaaatctt
ctttcaattgtagaggataactgtggactagataatggttcgactgcgtatggatttgct
tttgttgattgtgctgctttgaagttctgggttggttcctttaatgatgacagttcgtat
tctgctctggggactctgctaatgcaagtatcacctaaagaaattatatatgaaagtcat
gggctgtcaagagaagcccaaaaggctgtgaagaagtactcatcaactggatctactatc
tgccaaatcactcctgtacagacatctaccacttctgatgatcaatttgaagtacagagt
ctcattaactcaaaaggatactttaaaggattttgtaataatttggattatgcctttgac
ggaattatgcaccgcgatctttccttccgtgcacttggtgaacttattactcatctatcg
aggttgatgttaaatgatgctctgcggaatggagatattattccctatcagctctacaag
ggttgccttagaatggacggacagacacttattaatcttgagattttcagcaacactgct
gatggtagttcatcaggaacactgtacaattatctagacaaatgtataacgccatcaggt
aagcggctgttaaggcactggatctgtcatcctctaaaagatgtccaggaaatcagtcgc
aggcttaatgttgttgaggaaatgatggcacaaacagatgcttcttcacttgtgcaacat
cttcgcaagcttcctgacttggaacgattgcttggacgcatcaagtctaccgtaaggtct
tctgctttgctcatgttgcccttgattcggagcaaaatattgaaacagagagtgaaagag
tttggatctcttgtaaaagggctacgagttggattagatttattaaagttattgcatacg
ggacaacatgcaatatcatcatttgacaaattcttaaagcttccagaactgcgtggtgat
aatggaattgataaatttcttagtcagattgaagcagctatagatagtgactttcccaat
taccaggatcataatccaaacgactcaaatcccgaaattctgtcaatattgattgaatta
tttagtgagaagtgtactgaatggtctgaagttatccatgccataagctgtattgatgta
ctgagatcatttgctgttatatcaaaattttcacctggagttatgtgtagacctattata
ttgcctctttcagagccaatgagtttgtccgacgagtgtaagggaccaactcttagacta
aaagggttatggcatccatttgctcttggtgcgcatggaggatttccagttcctaacgac
gtacatctcggagaggatacttatggctatcatccctgtaccttactgttaactggacca
aatatgggtggaaaatccacacttttacgtgctacttgtcttgccgttatactggcccag
ctaggctgttatgtacctagtgagacttgcgttctttcacttgtggatatcattttcacg
cgtcttggtgcgtctgaccgaatcatgacgggcgagagtaccttcctcattgaatgcaca
gaaacagcatctgttttgcaaaatgctactcaaaattctttggtcctcctggatgagttg
ggtagaggaacaagcacttttgatggatatgctatagcatatgcggtattccgtcatctt
attgagaaggtgaattgtcgattactgtttgcaactcactatcatccacttaccaaggaa
tttgcttcacatccccgtgttatattgcaacacatggcctttactttcaagtcgaagtct
gaaatttcagctcaaggtgacaaggagctggtgtttctctataggctaaccaatggagca
tgtccagaaagctacggaatgcaagtggctctaaatgctggggtcccccaaccggtggtt
gaagctgcatccaaggccgggcaagttatgaagaaaatggtcggagaaagcttcaaatta
agcgaatctaggtctgagttctctacgttacatgaagaatggttaaagacccttttagca
gtctcagtgcccaatgagaatattttagatgataatgatgcctttgatactttgttctgc
ctttggcatgagatgaaatgttcaagtaaggtttga
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integrated database retrieval system