Apium graveolens (celery): 141711183
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Entry
141711183 CDS
T11340
Name
(RefSeq) TATA-box-binding protein-like
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
agrv Apium graveolens (celery)
Pathway
agrv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
141711183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agrv03000
]
141711183
03021 Transcription machinery [BR:
agrv03021
]
141711183
Transcription factors [BR:
agrv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
141711183
Transcription machinery [BR:
agrv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
141711183
RNA polymerase III system
TFIIIB
141711183
RNA polymerase I system
SL1/TIF-1B
141711183
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-GeneID:
141711183
NCBI-ProteinID:
XP_074369712
LinkDB
All DBs
Position
3
Genome browser
AA seq
205 aa
AA seq
DB search
MAEQGGGGGGSQCQAVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKR
FAALIMRIRDPKSKALIFASGKMVCTGAKSVQQSKLAARKYARIVQKVGFSAKFKDFKIQ
NIVGSCDVKFPIRLEALAYSHGAFSSYEPELFPGLIYRMRQPKIVLLIFVSGKIVITGAK
VREEIYTAFENIYPVLTEFRRNSQQ
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacagggtggtggtggtggtggtagccagtgccaggcagttgatctctccaag
cacccctctggaattgtacccactcttcagaatatagtatcaactgtcaacttggattgc
aagttagatttgaaagccatcgcattgcaagcaagaaatgctgaatataaccccaagcgt
tttgctgctctaatcatgcgaatcagggatccaaagtcaaaagcactaatatttgcttcg
gggaaaatggtttgtacgggagcaaagagtgtacaacagtcaaaattggctgcaaggaag
tatgcacgaattgttcaaaaggttggattttctgccaaattcaaggactttaagatacaa
aacattgttggttcttgtgatgtgaaatttcccatcagacttgaagctttagcatattcc
catggtgccttttcaagttatgaaccagaattgtttcctggtctaatatatcggatgaga
caacccaagattgtcctcctcatctttgtatcaggaaaaattgtaattaccggagcaaag
gtgagagaagaaatttatacagcatttgagaatatataccctgttcttacagagttcagg
aggaattcgcagcagtga
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