Apium graveolens (celery): 141711186
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Entry
141711186 CDS
T11340
Name
(RefSeq) TATA-box-binding protein-like
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
agrv Apium graveolens (celery)
Pathway
agrv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
141711186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agrv03000
]
141711186
03021 Transcription machinery [BR:
agrv03021
]
141711186
Transcription factors [BR:
agrv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
141711186
Transcription machinery [BR:
agrv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
141711186
RNA polymerase III system
TFIIIB
141711186
RNA polymerase I system
SL1/TIF-1B
141711186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
141711186
NCBI-ProteinID:
XP_074369713
LinkDB
All DBs
Position
3:297596988..297600679
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AA seq
205 aa
AA seq
DB search
MAEQGGGGGGSQCQAVDLSKHPSGIVPTLQNVVSTVNLDCKLDLKAIALQARNAEYNPKR
FAAVIMRIRDPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIVQKLGFSAKFKDFKIQ
NIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMRQPKIVLLIFVSGKIVITGAK
VREETYTAFENIYPVLTEFRRNSQQ
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacagggtggtggtggtggtggtagccagtgccaggcagttgatctctccaag
cacccctctggaattgtacccactcttcagaatgtagtatcaactgtcaacttggattgc
aagttagatttgaaagccatcgcattgcaagcaagaaatgctgaatataaccccaagcgt
tttgctgctgtaatcatgcgaatcagggatccaaagacaacagcacttatatttgcttcg
gggaaaatggtttgtacgggagcaaagagtgaacaacagtcaaaattggccgcaaggaag
tatgcacgaattgttcaaaagcttggattttctgccaaattcaaggactttaagatacaa
aacattgttggttcttgtgatgtgaaatttcccatcagacttgaaggtttagcatattcc
catggtgccttttcaagttatgaaccagaattgtttcctggtctaatatatcggatgaga
caacccaagattgtcctcctcatctttgtatcaggaaaaattgtaattaccggagcaaag
gtgagagaagaaacttatacagcatttgagaatatataccctgttcttacagagttcagg
aggaattcgcagcagtga
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