Apium graveolens (celery): 141711321
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Entry
141711321 CDS
T11340
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv04120
Ubiquitin mediated proteolysis
agrv04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141711321
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
141711321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
agrv04121
]
141711321
Enzymes [BR:
agrv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141711321
Ubiquitin system [BR:
agrv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141711321
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
141711321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141711321
NCBI-ProteinID:
XP_074369800
LinkDB
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Position
3:complement(724572..737800)
Genome browser
AA seq
669 aa
AA seq
DB search
MYTLDMALAAKSELKASSSDFTFSELAGASADGDGAPAEVDKELLCPICIQMMRGAFVTA
CGHSFCYTCIITHLENKRDCPSCGHFLSANQLFPNFVLDKLLKKASSRLISKTVSSAEQF
RQALQKGCEVSVRELDALLSLLAERKRILEQEEAERNMQILLDLLQYLRKQRVDELKEIQ
KDMQFVNEDINVVERQRIDSCRARNRSSPKVRLSTDNYTTIRSWSSSVEKNNSGSISNSQ
NSPGGMSTWNFLSKNMAGKTQANKLGLNKKDNINILNSQHTSQSGLSVVRKKRVHSQFNE
LEECYLQKRRQLVDQVENQVESNVMPREGFSAGLSDFQSVLTTFTRYSRMRVIAELRHGD
LMHTANIVSSIEFDCDEELFATAGVSRSIKVFDYASVVNEPADVHLPVAEMSTQFKLSCL
SWNKCTKSQLASSDYEGIVTVWDMATRQSVIEYEEHEKRAWSVDFSSTEPSMLVSGGDDC
KVKVWCTKQESSVLNIDMKANICCVKYNPGSSIHVAVGSADHNLHYYDLRNTSQPIHVFN
GHKKTVSYVKFLSTSEVASASTDSTLRIWDVKENLPVRTFKGHTNEKNFVGLSVNKDFIA
CGSETNEVFAYHKAISRPMTWHNFGAPDIDDTDEESASYFISSVCWMSDSPTLLAANSQG
IIKVLVLAE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtatacattggatatggcgctagcggcgaagtcggagctaaaagcctcttcctccgat
ttcaccttctccgagctcgccggagcttccgccgacggcgacggagctccggcggaagtg
gacaaggaactgctatgtccaatttgtatacagatgatgagaggcgcgttcgttacagcg
tgtggacacagcttctgttatacttgtataatcacgcatctcgagaataaacgcgattgt
ccttcttgtggacacttcctttctgctaatcagctctttcctaatttcgtgctcgataag
ttattgaagaaggcttcttcccgtctaatctcaaaaactgtctcctctgctgaacaattt
cgtcaggcattacagaagggttgtgaggtgtcagtaagggaactagatgccttgttatcg
ctgcttgcagagaggaagagaatactggagcaagaagaagcggaaagaaatatgcaaatt
ctgctggacttgttgcaatacttgaggaaacaaagagtggatgagctcaaggagatacaa
aaggatatgcagtttgtgaatgaggacataaatgtggtggagagacaaagaatagattca
tgtcgagcaaggaacaggtcttcgccgaaagtacgcctgtccactgataattatacaaca
attagatcttggtcttcatcagttgagaagaacaatagtggctccatctccaactctcaa
aattcacctggaggaatgtctacatggaattttctgtccaagaatatggctggaaagact
caagctaataagctaggacttaataaaaaggataatatcaatatattaaactcacaacat
acaagtcagtcgggtctttctgttgtgcgaaaaaagcgggtccactcgcagtttaatgaa
cttgaagagtgttacttacaaaagcgtcgccaattggtggatcaagtagaaaaccaggtc
gagtctaatgtcatgccaagagaagggtttagtgctggtctttcggattttcagtctgtt
ctgacaaccttcacgcgatatagccgtatgagagtgattgctgaacttagacatggagac
cttatgcacactgccaacatagtatcgagtatagaatttgattgcgatgaagagctgttt
gccactgctggagtctcgaggtctataaaggtttttgactatgcttcggttgtaaatgaa
cctgcagatgttcatttacctgttgcagaaatgtcaacacaattcaaactcagttgttta
agttggaacaaatgtacgaagagccagttagccagtagtgattacgagggaatagtaact
gtatgggatatggccaccagacagagtgtgatagagtatgaggagcatgagaaaagggca
tggagtgttgatttttctagcacagaaccatcaatgcttgtatccggtggtgatgattgc
aaggttaaagtttggtgcacaaagcaggaaagtagtgttcttaacattgatatgaaagca
aacatttgttgtgtcaagtataatcctggatctagcattcacgttgcggttggatctgct
gaccataatctccattattatgaccttagaaacaccagtcagccgattcatgtgttcaat
gggcacaagaaaactgtttcatatgttaagttcttgtccaccagtgaggttgcttctgct
tcaaccgatagcaccttaagaatatgggatgtgaaggaaaatttgcctgtccgtaccttt
aaaggccacacgaatgagaagaattttgtcggcctctctgtgaataaagacttcattgct
tgtgggagtgaaactaatgaagtgtttgcttaccacaaggcaatttctcgacctatgact
tggcataatttcggtgcacccgatattgatgatacagatgaagaatcagcatcttacttc
attagttctgtctgctggatgagtgatagtcctacactgctagctgccaatagccaagga
ataatcaaagtgcttgttcttgcagaataa
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