Apium graveolens (celery): 141711399
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Entry
141711399 CDS
T11340
Name
(RefSeq) WD repeat-containing protein PCN-like isoform X1
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
agrv Apium graveolens (celery)
Pathway
agrv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
141711399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
agrv03009
]
141711399
Ribosome biogenesis [BR:
agrv03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
141711399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR5
WD40
Beta-prop_WDR36-Utp21_1st
WDR55
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
WD40_Gbeta
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_ACSF4
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
PQQ_2
Beta-prop_SCAP
Vpu
Motif
Other DBs
NCBI-GeneID:
141711399
NCBI-ProteinID:
XP_074369925
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Position
3:complement(2369817..2376308)
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AA seq
817 aa
AA seq
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MQYQVFKSSSVEYKPSPIVALATSPDDSRIAAAREDGAVEIWLVAPGAAAWHCQLTIHGD
PNSRVSSLVWCNSSGFESFGRLFSSSIDGSISEWDLFELRQKSVVSIGVSIWQMAAAPYK
KSSYSHEKKYSQHIKAINDSSDDDCSESENDDDSVVTTDGSVIEDANIAMACDDGCVRIY
TVSDELIYRKSLPRVSGRTLSVTWSTDANKIFSGSSDGLIRCWDPETAREIYRITVGLGG
SGSGPELCIWSLLSLRTGTLVSADSSGSVQFWDSQMGTLLQAHTRHKGDVNALSASPSHN
MVFSAGSDGQVILYKLSRDVSRSTDEKSSVRLIKKWVYVGYSRAHTHDVRALTVAVPISR
EVTSADTFPDVKVKLKKGCGQKRPHDFTLHKWAHVGVPMLISAGDDTKLFAYAANEFTKL
SPHDICPVPQKPPMQLVLNTVFSQTSLLLIQASKWLDVFCIRAKTSGHPGKIFGPPISTA
TTDLVVRVKSKASQKIICSSMSNSGVFFSYSDQMKPSLLKLSKTEARKSAWIIEKRKLPN
LPFAHSMCFTHDSSRLMIAGNDRKIYVVDVESLKLICTYTPRCKDIDDEILSEPPITRMF
TSPDGQWLAAVNCFGDIYIFNLEIQRQHWFISRLDGASVAAGGFTPRNSNILVISTSSNQ
VYVFDVDAKQLGEWSIRHTFTLPKSYIEFPGEVIGLTFPTSPKASSVIVYSAWAMCEINF
GSPVSQVDDHDIVIDLDTAMEKLPGSPLNNELKRKLKDYDLKIKQTGKKNFKFHLFKNPV
LFVGHLSKDSLFVMEKPWSQVVATFDAPPVHRHIYGT
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatcaagtgtttaaaagcagtagcgttgagtataagccatctcctattgtagcg
ttagctacgagtcctgatgattctagaatcgccgccgctcgcgaagacggcgccgtcgag
atttggctcgtggctcctggcgccgccgcttggcactgccagctgacgattcacggagat
cctaattcgagagtttcgtcgttggtttggtgtaattcgagcggtttcgagtcgtttgga
cggttgttttcttctagtattgatggttcgatttccgagtgggaccttttcgagttgaga
cagaagagtgtggtatctattggtgtgtcaatttggcaaatggcggcagctccatacaaa
aaaagctcatatagtcatgaaaagaagtattctcagcatattaaagcgattaatgatagt
agtgatgatgattgtagtgagagtgagaatgacgatgattcggttgtgacaacggatgga
tctgttattgaagatgcaaatatcgcaatggcctgtgatgatggttgtgtgcgaatttac
actgtttctgacgagttaatttatagaaagtcattgccaagagttagtggacgcactttg
agtgtgacttggagtactgatgcaaataaaattttctcaggaagtagtgatgggttaata
agatgctgggatcccgaaacagcgcgtgagatttacaggataacagttggactaggagga
tcaggtagtggacctgaactctgcatatggtcattgctttccctcaggactggtaccctt
gtcagtgctgatagtagcggtagcgttcagttctgggacagtcaaatgggaactcttttg
caggctcatacccgtcacaagggtgatgtgaatgcgctctctgcatcgcctagtcataat
atggtcttttctgctggctcggatggtcaggtgatactctataagctctcaagagatgta
tcacgatcaactgatgaaaagtcttctgtcagattaataaagaagtgggtctatgtcggt
tattcgagagcacatacacatgatgtgagggccttgactgttgcagtacctataagtaga
gaagtgacttctgcagatacgttccctgatgtaaaggtaaagttaaaaaagggctgtggt
cagaagaggccccatgattttactttgcacaagtgggctcatgtaggtgttcccatgctt
atttcagctggtgatgacacaaagctttttgcgtatgctgcaaatgagtttaccaaattg
tctcctcatgacatatgtccagtgccacagaaaccaccaatgcaactggtactcaataca
gttttcagtcaaacttctttgcttctgattcaggcctccaagtggttagatgttttttgc
atccgagcaaaaactagtggtcatcctggtaaaatttttggccctcctatcagcactgcg
acgacggacttggttgtcagagtcaagagtaaggcttctcagaagatcatttgtagctcc
atgtctaattcaggagtgttcttttcatactccgatcaaatgaaaccaagtcttttaaag
ttaagtaaaactgaagctcgaaaaagtgcatggattatcgagaaaaggaaacttccgaat
ttgccatttgcacattccatgtgtttcactcatgattcttctcggctgatgatagcaggg
aatgacagaaagatatatgttgtagatgtggaaagccttaaactgatttgcacatacacc
cctcgttgcaaggacatcgatgatgaaattctcagcgagcctcctataacaaggatgttc
actagtcctgatggacagtggttggcagctgtcaactgttttggagatatatacattttt
aatctggaaatacaaagacaacactggttcatttccagattagatggcgcttctgttgcc
gctggtggttttacgcctcgaaatagtaacatccttgtaatatccacctcctcaaatcag
gtatatgtatttgatgtggatgctaaacagttgggtgaatggtctattcggcacacattt
actcttcccaagagttacatagaatttcctggagaggttataggacttacatttccaacg
tccccaaaggcttcttctgtaattgtctacagtgcctgggcgatgtgtgagataaacttt
ggatcaccggtgtctcaagttgatgatcatgatatcgtaatagatctagatactgcaatg
gagaaattacctggttcacctttgaataacgaattgaaaagaaagttaaaggactatgac
ttgaaaattaaacaaactggtaagaagaattttaagtttcacctttttaaaaatcctgta
ttgtttgtcggacatctttcgaaagattctctctttgtcatggaaaaaccatggagtcaa
gtggttgcaacattcgatgccccgcctgtgcacagacatatctatggtacataa
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