Apium graveolens (celery): 141711407
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Entry
141711407 CDS
T11340
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
agrv Apium graveolens (celery)
Pathway
agrv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
141711407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agrv03021
]
141711407
03036 Chromosome and associated proteins [BR:
agrv03036
]
141711407
Transcription machinery [BR:
agrv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
141711407
Coactivators
SAGA/TFTC/STAGA complex
141711407
Chromosome and associated proteins [BR:
agrv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
141711407
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
141711407
NCBI-ProteinID:
XP_074369936
LinkDB
All DBs
Position
3:2529272..2535976
Genome browser
AA seq
888 aa
AA seq
DB search
MDPSIMKLFEEDEDETMHSGADVEALTAALNRDIEGDKSVSNAAALSQGNNHNLGQLPLW
QTPNHDENVNCQNQQDVNVTQHQELNSAVKALNKHASSSENQLLQTDSSKELSSVPLQQK
QPQDKFLQRQQQNSNVIVQEQNRTQDPSTLSQYLRSQKMNTHQTGTTTQANNASKNGKQV
PFAMLFPVIEPLLDKDKAMQLRTIYSRLKQNEISKDAFVKHMRGLVGDHMLKLAIVRLQE
QDHRSSSVPPNQFASHSQVPAQQQQIKMPAVAAKSHSFVQLNQKGLNSPVDPSGPSSAAQ
TFSDSSNMAMDSNAHVLRDIKQERERPFPIQGLNKQQQHIQFPPSFPPYGTTGSNYHQYG
GGNIHSSAQSLKQQSQNMQARHVTARPGAGTVQSMGLPKYEKQNSVTEPMRLQGGKFSHS
ANLSKVLQNSVHRQSSLNQEQSNNGLISGHYVKQEQTDQANEQQKPRLSSSQGISSAQFE
QGNASRNLGDTSITMQQSRMGFSTSTDIIPCNGSISSSRTQLDSSSSLSSATPSVGPGNI
AKTPMKRANIGLEKTSESPGVEPLQQNKKQKVSHSDQSIEQLNDVTAVSGVNLREEEEQL
FSGPKEDSRVSEASRRVVQEEEEKLIFQIFPLQKKMAEIMRKWGLKNIGNDVERCLSLSL
EERLRALISNLLRLSKQRADMEKPRHRTIVTSDVRQQIIAINRKAREEWNKKQGDSEKSQ
GVIDTEGNTRVEGDKEKDYTHARPLKANKEDDDKMRTTAANVAARAAVGGDDKMSKWQLM
AEARQKRGGVDSALSSYPGKEVNRKLVSTPVKTARDKQDSEKRSRATTLATSGVIRKYGK
TQAMSQPGVPHNISVKDVIAVLEREPQTSKSMLIHRLYEKVHTDAICN
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggacccttctatcatgaagctctttgaagaagatgaggatgaaacaatgcattctggg
gctgatgttgaagctttaacagctgcccttaatcgcgatatcgaaggcgataagtctgta
tcgaatgctgcagctttatctcaaggaaacaaccataatttgggccagttgccgctgtgg
caaactcccaaccatgatgaaaatgtcaattgccaaaatcagcaggatgtgaatgttacc
cagcatcaagagctaaattcagctgtaaaagcactcaataagcatgcttctagttcagaa
aaccagctactacaaactgactcctcaaaggaattgagttccgttcccttgcaacagaaa
cagcctcaagataaatttttacaacggcagcagcaaaatagtaatgttattgttcaagaa
caaaatagaacacaagatccaagtaccttatctcagtacctgcggtcgcaaaagatgaat
actcatcaaactgggacaacaacacaggcgaataatgcctcaaaaaatggaaaacaagta
ccatttgcaatgttgtttccagttatagaaccattactcgataaagacaaagccatgcaa
ctcagaactatctatagtagactaaaacaaaatgaaatctccaaagatgcatttgttaag
cacatgagaggtcttgtgggagatcacatgctcaagcttgcaatagtaaggttgcaggaa
caggatcatcgcagctcatcagttcctcccaaccaatttgcatcacactctcaggttcca
gctcaacaacagcaaataaaaatgccagctgttgctgccaaatctcattcattcgtacaa
cttaatcaaaagggtctcaactctccagtagacccatctggtccctcttctgccgcacaa
acgttcagtgattcaagtaacatggcaatggatagtaatgcacatgtattgcgtgatatt
aagcaagaaagggagcgcccctttccaatacagggacttaataagcagcagcaacatata
caatttcctccatcttttccaccttatggaaccacaggcagtaactatcaccaatatggc
ggaggaaatatacatagctcagctcaatctctgaaacaacagtctcaaaatatgcaggca
aggcatgttacggctcgtccaggcgctggaacggttcaatccatgggtttgcccaagtat
gagaagcagaattctgttactgaacccatgagactgcagggtggtaaattttctcactca
gcaaatctttcaaaagtgctacagaattcagttcatagacaatcatcgcttaatcaagag
cagagtaataatggtttaatttcaggacattatgtgaaacaagagcaaactgatcaggca
aatgagcaacagaaacctcgtttgtcttcctcgcaagggatatcctctgcacagttcgaa
caaggaaatgcttctaggaacttgggtgatacatccattactatgcagcaatctaggatg
gggttctctacatcgacagatatcattccgtgcaatggaagtatatcatctagtagaact
cagctggactctagtagctcgttatcgtctgctaccccttcagttggtcccggaaatatt
gccaaaacaccaatgaagagggctaacattggcctggaaaaaacatcagagtcgcctggc
gtggaacccttgcaacagaataaaaagcaaaaagtttctcattctgatcaaagtatagag
caacttaatgatgttactgctgtcagcggagtaaatttgcgggaagaggaagaacaatta
ttttctgggcccaaggaagacagtagagtctcagaagcatcacgtagggttgtgcaagaa
gaagaagaaaagttaatttttcaaatatttccacttcagaaaaaaatggctgaaatcatg
agaaaatggggcctaaagaatataggcaatgacgtggaacgatgcctgtcactgagtttg
gaggaacgtttgcgtgcactgataagtaatttgctcaggctgtctaaacagcgggctgat
atggagaagccaagacatcgaactattgtcacctcggatgtacgccaacaaatcatagca
ataaaccgtaaagcaagggaagaatggaataaaaaacaaggcgactcagaaaaaagtcag
ggtgtaattgatacagaaggtaatactagggttgaaggagacaaggagaaggattatact
catgcaagaccgctcaaggccaacaaggaggatgatgataagatgcgaacaacagctgca
aatgttgctgcgcgagctgctgtaggaggagatgacaagatgtcaaagtggcaattaatg
gctgaagcccggcagaaacgtggaggggttgattctgctttatcgtcttatccaggtaaa
gaagtgaaccgcaagcttgtatctacccctgtcaaaactgcaagggacaagcaagatagt
gagaaaaggagtcgagcaactactcttgccacatccggagtgataaggaaatatgggaag
actcaagccatgtctcaaccaggcgttccacataatatctctgtcaaggatgttattgct
gtcctagaaagggagccccagacatccaagtcaatgttaatccatcggttgtacgaaaag
gtgcacacagatgctatatgtaattag
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