KEGG   Apium graveolens (celery): 141711822
Entry
141711822         CDS       T11340                                 
Name
(RefSeq) histone deacetylase 19-like isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
agrv  Apium graveolens (celery)
Pathway
agrv03082  ATP-dependent chromatin remodeling
agrv03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:agrv00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    141711822
   03083 Polycomb repressive complex
    141711822
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:agrv03036]
    141711822
Enzymes [BR:agrv01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     141711822
Chromosome and associated proteins [BR:agrv03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     141711822
   HDAC complexes
    Sin3A-HDAC complex
     141711822
    BRAF-HDAC complex
     141711822
    REST complex
     141711822
    SHIP complex
     141711822
    MiDAC complex
     141711822
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     141711822
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    141711822
  Chromatin remodeling factors
   NuRD complex
    141711822
SSDB
Motif
Pfam: Hist_deacetyl Pox_polyA_pol
Other DBs
NCBI-GeneID: 141711822
NCBI-ProteinID: XP_074370608
LinkDB
Position
3
AA seq 517 aa
METGGNSLSSGPDGVKRKVFYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLRDMQ
VLKPIPARDKDLCRFHADDYVSFLRGITPETQQDQARQLKRFNVGEDCPVFDGLYSYCQT
YAGGSVGGAVKLNHGNCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHEVGVM
EYYSFICVHVLQRVLYVDIDIHHGDGVEEAFYATDRVMTVSFHKFGDYFPGTGDVRDIGH
ASGKYYSLNVPLDDGIEDESYQSLFKPIMGKVMEVYRPGAVILQCGADSLSGDRLGCFNL
SIKGHAECVRYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGTELEDKMPQHEYYEY
FGPDYTLHVAPSNMENKNSRQVLDDIKAKLLDNLSKLQHAPSVPFQERPPDTEFPEADED
QDAIERWERKDDMDVDDERKPFSGRVKREILEPEHIDAAAAREGEHAKNMDTTFTETASL
KLYQASNPISVSMDGLHINSEQGNSSKQSDGRTDMDS
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggaaactggaggtaattctttatcatctggcccagatggggtgaaaagaaaagtgttc
tatttctatgatccagaagttggcaattattattatgggcaaggtcatccaatgaagccg
cacagaatccgtatgacacatgctcttctggctcactatggtttactgcgagacatgcag
gttctcaagcccattcctgctagagacaaggatctttgcaggtttcacgctgatgattat
gtgtctttcttgaggggaatcactcctgaaacacagcaagatcaagcaaggcagctgaaa
aggtttaatgttggggaagactgccctgtcttcgatggtctctattcctactgtcaaact
tatgctgggggctctgttggtggtgctgttaaattaaaccatggaaattgtgatattgct
ataaactgggctggtggacttcaccatgcaaaaaaatgtgaagcttctgggttctgctat
gtgaatgacattgtgcttgctattctagaacttctaaaagtgcacgaggttggtgtaatg
gaatattattcttttatttgtgttcatgtgctccagcgtgttttgtacgttgacattgat
attcatcacggtgatggtgttgaggaggccttttatgctactgacagggtgatgacggtt
tcatttcacaaattcggagattattttcctggtacaggtgatgtacgggatataggtcat
gcttctggaaaatactactctcttaatgtcccgttagatgatggaattgaggatgaaagc
taccagtccctgttcaaacctattatgggtaaggtgatggaagtttacaggcctggtgct
gtaattttacagtgtggtgcagactctctatccggagacaggttaggttgctttaatcta
tcaatcaaaggccatgcggagtgcgtgagatatatgcggtcttttaatgtgccactactt
ttgcttggtggaggtggctacactatacgaaacgttgcccgttgttggtgttatgagact
ggagtcgcccttggaacagagcttgaggataagatgccacaacacgagtattacgagtac
tttggtccagactatactcttcatgtagctccaagtaacatggaaaataagaactctcgt
caggtattggatgacataaaagcaaagcttcttgataatctctcgaagcttcagcatgca
ccaagtgtcccattccaggagcgcccacctgataccgagtttccagaggctgatgaagac
caagatgcaattgaaaggtgggagcggaaggatgacatggatgttgatgatgaacgtaag
cctttttctggaagagtgaagagggaaatattggaacctgagcacatagacgcggcggct
gcaagggaaggggaacatgcaaagaatatggacacgacattcacagagactgcatcattg
aagctttatcaggcctcaaatccaatttcagtatcgatggatggattgcatattaattca
gaacaaggaaactcaagcaaacaatctgatggacgtactgatatggattcgtag

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