Apium graveolens (celery): 141712079
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Entry
141712079 CDS
T11340
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
KO
K14962
COMPASS component SWD2
Organism
agrv Apium graveolens (celery)
Pathway
agrv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141712079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141712079
03036 Chromosome and associated proteins [BR:
agrv03036
]
141712079
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
141712079
Chromosome and associated proteins [BR:
agrv03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
141712079
COMPASS/SET1 complex (yeast)
141712079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141712079
NCBI-ProteinID:
XP_074370972
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Position
3:32949816..32955339
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AA seq
327 aa
AA seq
DB search
MAIVNQLSDDTVRNMSIGAVFSDFGGKIFSLDFHRTEDLLVTASEDDSVRLYDIANAKLL
KTTYHKKHGADRICFTHHPSSFICSSRYGLDSNGESLRYLSMYDNRCLRYFKGHKERVVS
LCISPVNDSFMSGSVDHTVRIWDLRVNACQGILRLRGRPAVAYDQQGLVFAVAMEGGAIK
LFDSRSYDKGPFETFLVGGDMAEVCDIKFSNDGKSMLLTTRKNNTYILDAYGGEKRGVFS
LDPSPDTEIEATFTPDGQYVISGSGDGTMHAWGINSGSKVGSWDSNIGVVSCLKWAPRRV
MFAAASSVLTFWIPDESKSEVIKSEAC
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcgatagtgaatcaactgagtgacgacactgttcgcaatatgtccattggagctgtc
ttctctgattttggcggaaaaatattttcactcgattttcatcgcactgaggatttatta
gttacagctagcgaggatgattcagtgcgcttatatgatattgcaaatgccaagttgctt
aaaaccacatatcacaagaaacatggtgctgatcgaatatgctttactcaccacccaagt
tcttttatatgttcttcgagatatggtttggattcaaacggggaatccctgcggtatctg
tctatgtatgacaaccggtgccttcgttacttcaaagggcacaaggagagagtcgtgtcc
ctttgtatatctccagttaatgacagtttcatgtctggttcagttgaccatactgtcaga
atatgggatcttcgtgtaaatgcctgccaggggattttgcggcttagaggtcggcctgca
gttgcttatgatcagcaaggccttgtgtttgccgtagcaatggaagggggtgctattaaa
ttgttcgactctcgttcgtatgacaaggggccattcgagacatttttagttggcggagat
atggccgaggtctgtgatattaaatttagcaatgatggtaaatcaatgctcttgaccacc
agaaaaaataatacatatattcttgatgcatatggaggggaaaagcgaggcgttttcagt
ttggatccatctccagatacagaaatagaagcaacattcaccccagatggtcaatatgtg
atatcaggttcgggtgatggaactatgcatgcttggggcatcaacagcggcagtaaggtg
ggatcatgggacagcaacattggagtggtctcatgcttgaaatgggcacctaggagggtc
atgtttgccgctgcttcttcagttctcacattttggattcctgatgagtcaaaatccgag
gtcattaaatctgaagcttgctag
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