Apium graveolens (celery): 141712398
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Entry
141712398 CDS
T11340
Name
(RefSeq) uncharacterized protein LOC141712398 isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
agrv Apium graveolens (celery)
Pathway
agrv03013
Nucleocytoplasmic transport
agrv03015
mRNA surveillance pathway
agrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141712398
09122 Translation
03013 Nucleocytoplasmic transport
141712398
03015 mRNA surveillance pathway
141712398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141712398
03041 Spliceosome [BR:
agrv03041
]
141712398
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
141712398
Spliceosome [BR:
agrv03041
]
Complex C
Other components
EJC/TREX
141712398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
141712398
NCBI-ProteinID:
XP_074371423
LinkDB
All DBs
Position
3:complement(70274931..70279624)
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AA seq
740 aa
AA seq
DB search
MSSYPVLYNKPIDQWKVTELKDELKKRRLPIKGLKDDLIKRLDESLRQEIGNTNKSADED
FASQPEPVVQYQDAARMPGFDEKSSVTISKSEDKSTDLNVDVNAGSIFQEQVVEGDTKAS
EPVMEAETTVGSDVQENTVKSSHEVTTVETVQEVTTVETVQEVTTVETVQEVTTEFSPVV
GVAELKSSGQELLNNGAQNICEDINIQPKNQNLNPLNEVAKFNSSDLETQVSEVSEVKAD
SNSTHNVPVNEKIEDLNIQPQNEDSNPPHEVNLNSFAPESQVFEVSKVTSESISTDNVKI
NEKIEFKDNIIADDVKLDFDVKHDREEPSSGNVDLDDGNLQQMDVKQPEENEVKVEETAN
IADNPDIAKNNDSGDVEFSEKLNLDRSSGDDSIDEDPLESKQIESKSTSDEAGDKREKME
VTVVREDLPVDAMVVDTISDGKVESKNVTAVTSMKRKPHADQETIGNVDTTKRQRRWNSE
GLKALEPNSDNVSPSITPRGTFQSNAKRNFSKSDSMSGVETPKERTVPPSLKPPTSALRI
DRFVRPFTLKAVQELLGKTGKVINFWMDHIKTHCYVSYSSVEEAVETRNAVYNLQWPANG
GRLLVAEFVEPEEVQMRIEAPPAAPVNTGTVQPAVPVPMQSQPSPRVQAQRLAPQTLPPQ
APVSLPPPPPTPVSNPPPAARERALPPPPPIPERVEPPIVTLDDLFRKTKATPRIYYLPL
SDEQVKAKQSAEGKPPSSRA
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatatcctgttctgtacaataaaccaattgatcaatggaaagtcactgagctg
aaagatgaactcaagaagaggagattgccaattaaggggttgaaggatgatttgatcaag
cgtttggatgaatcacttcgacaggaaattggaaataccaacaaaagtgctgatgaagat
tttgcttctcaacctgaacctgttgttcagtatcaagatgccgcaagaatgccaggattt
gatgaaaaaagtagtgttactatcagcaagagtgaagacaaaagtactgatctgaatgtt
gatgtcaatgcggggtcaatttttcaggaacaagttgtggaaggggatacgaaggcatcg
gaacctgtcatggaagctgaaactactgtggggtcggatgtccaggaaaatactgtgaaa
agcagccatgaagtgaccacagtggaaactgttcaggaagtaaccaccgtggaaactgtt
caggaagtaaccaccgtggaaactgttcaggaagtaaccacagaattcagtccggtggtt
ggtgtagctgaactaaaatcgagtgggcaggagttgctgaacaatggagctcagaacata
tgtgaggatataaatatccaaccaaagaaccagaacttgaaccctctaaacgaggtggcc
aaattcaactcatctgatcttgaaacccaggtatctgaggtcagcgaagtaaaagctgat
tctaattctactcataatgtccctgttaatgagaaaattgaggatcttaacatccagccg
cagaacgaggattcaaatcctccacatgaggtcaatctcaactcctttgctcctgaatcc
caggtatttgaggtcagcaaagtaacatctgaatctatttctactgataatgttaaaatt
aatgaaaaaatagaatttaaggataatataattgctgatgatgtcaaattagactttgat
gttaagcatgatagggaagagccatcatcgggcaatgttgacctggatgatggcaattta
caacaaatggatgttaaacaaccagaagaaaatgaagttaaagttgaagagactgcaaat
attgctgacaatccagatatagccaagaacaatgatagtggagatgtagagttctcagaa
aagttaaacttggacagaagttctggtgatgattcaatagatgaggatccattagagagt
aagcagatagagtcaaaatcgacatctgatgaagcaggtgataagagggagaaaatggag
gtgactgtagtgagagaagatttacctgttgatgcgatggtggttgatacaatttctgat
ggaaaagttgaaagtaaaaatgttactgctgttacttccatgaagcgaaaacctcatgca
gaccaagaaacaattgggaacgtcgatactacaaaaagacagcgccggtggaactctgaa
ggccttaaagctcttgagccaaatagtgacaatgtatcaccatctattacacctaggggt
acatttcagtcaaatgcgaaacgtaatttttccaagtctgattcaatgtccggtgttgaa
acacccaaagaacgtactgttccaccatctttaaagcctccaacaagtgctcttaggatt
gatcgatttgtgcgtccttttactttgaaagctgtgcaagaactccttggaaaaacaggc
aaagttatcaacttctggatggatcacattaaaactcactgctatgtcagttattcatcc
gttgaggaagctgtagagacacgaaatgctgtatacaatctgcaatggccagcaaatgga
ggtcgtcttctggttgctgagtttgttgaacccgaggaagtgcaaatgcgaatagaggct
cctccagctgcccctgttaatacaggtactgtccaaccagctgttcctgttcccatgcag
tcgcagccctctcctcgtgtacaggcgcagagactggcgcctcaaactttgccacctcaa
gctccggtttctctccctccgccaccacctacaccagtatccaatcctcctccagcagca
agggaacgagctcttccaccaccacccccaatccccgaaagagttgagccaccaattgtc
actctggatgatctctttaggaaaaccaaggcaactcctcgcatctattacctaccgttg
tctgatgaacaagtgaaagccaagcaaagtgcagagggaaaaccaccaagcagtagggct
tag
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