Apium graveolens (celery): 141712472
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Entry
141712472 CDS
T11340
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
agrv Apium graveolens (celery)
Pathway
agrv04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
141712472
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
agrv04040
]
141712472
Ion channels [BR:
agrv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
141712472
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
141712472
NCBI-ProteinID:
XP_074371542
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Position
3:complement(78702601..78711430)
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AA seq
733 aa
AA seq
DB search
MFGSKSDYMGGQREKFARLDDLDSRLSSPSSSVGMNTCGFNIEGLGRSSHAKNSPSKSFK
QGMRKSSEGLKSIGRSFGFGVSRAVFPEDLKVSENKIFDPQDKFLLLCNKLFFVSCIVAV
SIDPLFFYLPVFHESSNCLGVDRKLAIIATTLRTVIDVFYLIRMALQFRTAYIAPSSRVF
GRGELVIVPAEIAKRYLKSYFIVDFLAVLPVPQIVIWRFLHTSDASDVLATKQALLCVIL
LQYVPRLLRIIPLTSELKRTAGVFAESAWAGAVYYLLLYMLASHFVGAFWYLLSVERYDT
CWQRACKDSGNCKTNFLYCGDQNLQSYEAYNSWLNISESVLTNKCGVDGDDKPFDFGIFE
QALSSGIVYSKKFISKYCYCLWWGLQNLSTLGQGLQTSTYPGESIFSIALAIFGLILFAL
LIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQDLRERVRRYDQYKWLETRGVDEE
ALVHGLPKDLRRDIKRHLCLALVKRVPLFENMDERLLDAICERLKPCLYTESTYIVREGD
PVDEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGVNLPSSTRT
GKALTEVEAFALTADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYTK
RKILELRRKEEEAEEMASSNASSGSYSLGATFLASRFAANALRGVHRNRNLKSARELVKL
QKPSEPDFTAEAD
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttcaaaatctgattatatgggtggccagagggagaaatttgcaaggctggat
gacttggactctagattatcatcaccatcttcctctgttgggatgaatacatgcgggttt
aacatagaaggtttaggtcgttcaagtcatgcaaaaaattccccatctaaatcttttaag
caaggaatgagaaaaagttctgaaggacttaagtccattggccgatcatttggatttggt
gtttctcgagcagtctttccagaagatctaaaagtttcagagaataagatatttgacccg
caggacaaattcctcctgttgtgtaataaactattcttcgtttcatgtatcgtggcagtg
tctattgatccactgttcttctaccttccagtttttcacgagtcatcaaattgtttgggt
gttgataggaagctagcaattattgcgacaacactgcgaacagtcattgacgttttctat
ctcatacgcatggctcttcagttccgtactgcatatattgcaccgtcatctcgggttttt
ggacgaggtgaacttgtgatagtacctgcagaaattgctaaacgatacttaaagagctat
tttattgttgattttctggcagtgcttccagtaccacagatagttatctggagatttctg
cacacttctgatgcatctgatgtattggctacaaagcaagccttactttgtgttatcttg
cttcaatatgtccctaggttactgcgcatcattcctttaacgtcagaacttaaaagaact
gctggggtctttgctgaatcagcatgggctggtgctgtatactatttgttgctgtacatg
ctcgcaagtcattttgttggggcattttggtatctgttatctgtagaacgttatgataca
tgctggcagagagcttgtaaagatagtggaaactgcaaaacaaattttttgtattgtggt
gatcagaacttgcagagctacgaagcttacaatagttggctcaacatcagcgagtctgtt
cttactaacaagtgcggtgtagatggtgatgataaaccatttgattttggaatattcgaa
caggctttgtcatctggtattgtttattcaaaaaagtttatttctaagtactgttactgc
ctgtggtggggactacagaatttaagtacacttggccagggacttcagaccagcacttat
cccggggagtccatattttcaattgcattagccatatttggcctcattctctttgcacta
ttaatcggcaacatgcagacatacctccagtccctaactattcgactagaagagatgagg
gttaaaaggcgtgactcagagcaatggatgcatcatcgcttacttccacaagatctccgg
gaacgagttagaagatatgatcagtataagtggttggaaacacgtggagtagatgaagag
gctttggtccatggccttccaaaggatctgagaagagacattaagcgccatctttgtctg
gctttggtgaaaagggttcctttgtttgaaaatatggatgagagattgctggatgcaatt
tgtgagcggctgaaaccatgtctctacacagagagtacatatatagttcgagaaggagat
ccagttgatgagatgctattcataatacgtggccgcctagagagtgtcaccactgatgga
gggagaagcggttttttcaaccgcagtttactgaaagagggggacttctgtggagaggaa
cttttaacctgggcacttgacccaaagtctggtgtaaacctgccgtcatctactcggaca
gggaaggctctgacagaggtagaagcttttgctctaacagctgatgagttaaaatttgtt
gcctctcaattcaggcggcttcacagtagacaggttcaacacacattccgcttctactca
caacaatggagaacttgggctgcttgcttcattcaggcagcttggcggagatataccaaa
aggaagattttggaacttcgacggaaggaagaagaagcagaagagatggccagcagcaat
gctagtagtggttcatacagccttggcgcaaccttcctagcttctagatttgcagcaaat
gctcttcgcggggtccatcgtaatcggaatcttaagagtgctagggaactggtgaagcta
caaaaaccttcagaacctgatttcacggcggaagcagattag
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