Apium graveolens (celery): 141712482
Help
Entry
141712482 CDS
T11340
Name
(RefSeq) putative CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
agrv Apium graveolens (celery)
Pathway
agrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141712482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141712482
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141712482
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
141712482
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
141712482
NCBI-ProteinID:
XP_074371551
LinkDB
All DBs
Position
3:79172080..79173497
Genome browser
AA seq
292 aa
AA seq
DB search
MLPNCARFVIWLYLAVQIMSMLLKNDSIQIREVWNDNLEEEFALISDIVDDYPFVAMDTE
FPGVVIRPILGFKSNTEYNFHTLKANVDLLKLIQLGLTFSDENGNLPTCGTDKYCVWQFN
FCDFNLTKDLYANDSIELLGRSGIDFKKNAEKGIDAGRFSALLMSSGIILNDNIHWVTFH
SGYDFGYLLKILTCQKLPDTQEGFFDLLKMYFPVFYDIKHLMRFCNSLHGGLNKLAELLD
IERVGICHQAGSDSLLTCCTFMKLKETFFNGSPEKYAGVLYGLGVENGKVAY
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgttgccaaattgtgcgagatttgttatttggttatatttggcggttcaaataatgtcg
atgctgttgaaaaacgattcgattcagataagggaagtttggaatgataatctagaagaa
gagtttgcattaatttccgacatagttgatgactatccttttgtagctatggatactgag
ttccctggcgttgttattcgcccgattttgggtttcaagagcaacactgaatataatttc
cataccttgaaggctaatgttgatctgttgaagttgattcagttaggtcttacattctct
gatgagaatgggaatttacccacttgtggaaccgacaagtactgtgtctggcagttcaat
ttctgtgattttaatttgaccaaagatctctatgctaatgattcgattgagcttctgggc
cggagcggtattgattttaagaagaatgctgagaagggtattgatgctggcaggtttagt
gcgctgttgatgtcgtcggggattattctgaatgataacattcattgggtaacttttcac
agtggctatgattttggctacttgctgaagatactgacttgccagaagctgcctgataca
caggaggggttctttgatttgctgaaaatgtacttcccggtgttttatgatatcaagcat
ctcatgaggttctgcaatagtcttcatggtggcctgaacaagcttgctgaacttctggat
atcgagagagttgggatctgtcaccaagctggttcggatagcttgcttacttgctgtacc
ttcatgaagctgaaagaaacctttttcaatggctcacctgagaaatatgctggggtgttg
tatggtcttggtgttgagaatggtaaagttgcttattga
DBGET
integrated database retrieval system
