Apium graveolens (celery): 141713069
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Entry
141713069 CDS
T11340
Name
(RefSeq) nuclear-pore anchor isoform X1
KO
K09291
nucleoprotein TPR
Organism
agrv Apium graveolens (celery)
Pathway
agrv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141713069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141713069
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141713069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR
Nucleoprot-TPR
TPR_MLP1_2
OVT1
Motif
Other DBs
NCBI-GeneID:
141713069
NCBI-ProteinID:
XP_074372401
LinkDB
All DBs
Position
3:211102387..211122564
Genome browser
AA seq
2065 aa
AA seq
DB search
MPIFLSDEEFSRCSHDGALVAEKADSYIRDLFNQLETVKAQADAASITAEQTCSMLEQKY
VSLSGEFSALQSQQSQLQTSFDMRVAEIAQLQADKRQTYLQSIEKDGVIERLNTESSEFH
KSKRQLLELLEQKNIEISEKNVTMKSYLDKIVNLTDNAATREAKLCDAEAELARSAAHCA
RILQEKELIERHNIWLNDELTAKINSFNELRRAHNEFEADMSSKLADAEKQYNHTCGSLE
RKQERVKDLELQLTSLQEELCSTKEEAASAEERFQKEVATLTKLVDLYKESIEEWSKKAG
ELEAVIKALETHSSQVESDYKEKLDNEVSAKKELEKEVASLREKLEKCEVQLESARSSSE
MNLITLGAASHKIWADTEETSKTAEGNNMLVPAIPAGVSGTALAASLLRDGWSLAKMYAK
YQEAVDALRHEELGRKEAQAIMERVLYEIEEKAGLILDERAEHERLMEAYSAVNQKLQHS
LSEQTSLQKTILDLKADLKRRERDFVVSQKEVVDLQKQVTVLLKECRDIQLRCGSANSDL
DGEAMKISADQIMAESDAQRVISERLVTFKDMNGLVEQNTQLRSLVRRLSDQIENREAEL
KVNFQEELQKHLAEAGSRVDAVLARAEEQERMIESLHGSVALYKKLYEDEQKHHSSSPSS
PDALPESRRNVVRLLQESSEEALRKAHEQAYARVKSLEEESAKLRSELVTLRMERDKMGL
EAKFAQEKLHGSMKEFQHQRADMDNLISRNIEFQRLLVHYQQKVRESSDSIQVAEELSRK
LSMEVSVLKQEKETLMNSEKRASDEVRSLSERVHRLQVTLETIQSTEEVREEARGSERRK
HEEYIKRIEKEWAEAKKDLQQERDNARTLRLEREGSLSSAMKQVEDKGKELANALHAVAT
AESKAAVAEARLSDLEKKIKCSEIKVSANDEHFQGSTDEAVADLQSAKEEILKLKEEVKL
SKDHMLQYKAIAQVNESALKQIEIAHENFKVEADKLKKSLESEITSLQERVNELEAEYSI
KRKEAASAAALQEEIYASSLSEVALLKEEISSKMSQITILETQLLAMKDSLEEEQQKWRT
AQNNYERQVILQSETIQELTKTSQALASLQKEASDLRNVTNLLKAENSDLKAKWETEKLM
LENLKSEAERKCNEINEQNVILHSRLEALHIKLAEREHGSAGNSSRNVDQDFPGDAGLQN
VVKYLRRTKEIAETEISLLKQEKFRLQAQLDSAIKTAETSQASLRAERENSRALLYSDEE
FKSLQLQVREMNLLRESNAQLREENKHNFDECQKLRETSQKAKTEIENLETKIAVRENDV
KALKKEKEILEMEKEHLEKRVHELLERCQNISVEEYDRMKIDIQHMQLNLKGKDSQLQEI
QRSISEKEEQILHLEQEVGRSRKELDDREKRVNELLKVEASLKSDVEKQKKMSLHLKRRL
ENLSKEKEELSKENQSLSKQLEDFKQGKRNVADALGEQTMREKEKEKDTRIQMLEKTVEK
LRDDLRKQKDEYKMEKSQRIKTQNTIRELCHPINQEKKKLEEELTKHKHALRIVSEKVQT
LNHGGSQPEGTPAVQVFSGNLLDEMATAYLLSIENFEQFAQPIISVVEHPAPADSSVAAD
ILGSGSSSGHTVPIPASAQVPPLSGIPPAKTAEERERRANLTKQYADSRKAGRKLVRPRI
VKPEEPPADTEMSEAEEPNNGGKPTLSQNVETHCNPTLLTQPATRKRVSTSELQEEAAIA
HDSNTELSAPLQKKSKGLDFSIEGVESQSSPIIETPKLPAVEASVDVTALPHGSKEEASA
GWKDEMETIAEQAELSKSDGQNEVELQNEIAMGEEVSAGPSDTAGQDLHPFTEGEHEEPL
AESGSDREEGELAADGGDLEGAGSPEPECQYEEVEAPDDSPDETVVPVTDDIEAISSPQV
GDDSKNEEGEIMEETVEPSDRSTGVTDLAAAEGEQIATILDSGGRTSSSAAITGITDHGS
IVVPAHDEVNQASPSRNRSPSVEQVSPANKSSTTINLSERAKEMSALRQRPQARGGSTSV
ARGRARTIRGRAPPRGFRGRGTSGQ
NT seq
6198 nt
NT seq
+upstream
nt +downstream
nt
atgccgatttttctatcggacgaagagttctctcggtgttcgcacgacggagctctggtg
gcggagaaagcggactcgtatattagagatttgtttaatcaattagagacggtcaaagct
caggctgatgcggcttctattacggcggaacagacttgttctatgcttgaacagaagtat
gtttcactctctggagagttcagtgcgctacaatctcaacagtcgcagcttcagacttct
ttcgatatgcgtgttgcggagattgcacagcttcaggccgataagcgccagacttatttg
caatcgattgagaaagatggagtgatcgagaggttgaatacggagtcgtcggagtttcat
aagtctaagagacagttgctggagttgttggagcagaagaatattgagattagtgagaaa
aatgtcactatgaagagttaccttgataagattgtaaacttgactgacaatgctgccacg
agggaagccaaactgtgtgatgctgaagcagagctggcgcgctctgctgctcattgcgct
cgtattttacaggagaaagagcttattgaaagacataatatttggcttaatgatgagctg
acggcaaaaattaatagtttcaatgagcttcgtcgagcacataatgaatttgaggctgat
atgtcttctaagcttgcagatgctgagaaacagtacaatcatacgtgtggctctttggag
cgaaagcaagaaagggttaaagatctggagttgcagctgacatccttgcaagaggagttg
tgttctacaaaggaagaggctgcatctgctgaggagcgatttcagaaggaagttgctacg
ttaacaaagcttgttgatctgtacaaagagagcatagaggaatggtctaaaaaggctgga
gagctagaggctgtgatcaaggctttggagacacattctagtcaagttgaaagtgattat
aaagaaaagcttgacaatgaagtttctgcaaagaaagagttagaaaaggaagttgcatcc
ttgagggagaaacttgagaagtgtgaagtacagctggaaagtgctaggagttcaagtgaa
atgaatcttataactttgggggctgctagccataaaatatgggctgacacagaagaaaca
agtaaaacagctgagggtaataatatgctggtgcctgctattcctgcaggagtttcagga
acagcattagcagcttcacttctacgagatggatggagtctagccaaaatgtatgccaaa
taccaagaagctgttgatgctttacggcatgaagaattaggtaggaaggaggcccaggcg
ataatggagcgggtcctatatgagattgaagagaaagctggtctaatattggatgaacga
gcggaacatgagagattgatggaggcctactccgcagttaaccaaaaattgcagcattcc
ctatcagaacaaactagtttacagaaaacaatcctggatttgaaggcggatttgaagagg
cgtgagcgcgattttgttgtatcacagaaagaagttgtcgacctccagaaacaggtgacg
gtgctcctaaaagaatgtcgggacatacagcttcgatgtgggtctgccaacagtgacctt
gatggggaagccatgaaaatttctgctgatcagataatggccgagtctgatgctcaaagg
gttatatctgagcgtctggtgacttttaaggatatgaatggattagttgaacagaatacc
cagttgcgtagcctcgttaggaggctatccgaccagattgagaacagagaagcagagctg
aaggtaaactttcaggaggaactccaaaaacatttggccgaagctggctccagagttgat
gcagtattagctagagctgaagagcaagagcgcatgatagagtctcttcatggttcggtg
gctttgtacaaaaagttatatgaggatgaacagaaacatcactcttcatctcctagctca
ccggacgctcttcctgaaagtcgaaggaatgtcgtcaggcttctacaggaaagctcagag
gaagctttaagaaaagctcacgagcaggcatatgcacgggtgaagagtcttgaagaagag
tcggccaaattaaggagtgagcttgtgacactaagaatggagcgagacaaaatgggttta
gaagcaaagtttgcacaggaaaaacttcatggatctatgaaagagttccaacaccagaga
gctgatatggataaccttatttcaagaaatatcgagttccaacgactgttagtccactat
caacagaaagtgcgtgaaagttcagattctatacaggttgctgaagaactttcaagaaag
ctgtctatggaggtatctgtcttgaaacaagaaaaggaaactttaatgaactctgaaaag
agagcttcagatgaagttcgtagtttgtcagagagggttcatcgattacaggttactcta
gaaacaattcaaagtacagaagaagttcgtgaggaagccagaggcagcgagaggagaaaa
catgaggagtatattaaacgaatagagaaagaatgggctgaggcaaagaaagatctccag
caagagcgggataatgctcgcaccttaagacttgaaagagaaggttccttaagtagtgcc
atgaaacaagtggaagacaaggggaaagaattagcaaatgctttgcatgctgtagctaca
gctgaatcaaaagctgctgttgccgaggcccggctttctgatctggagaagaagatcaag
tgttcagaaataaaggtctctgcaaatgatgaacacttccaaggttcaactgatgaggct
gttgctgacttgcagtctgcaaaagaagagattcttaagttgaaagaagaagtgaagctt
agcaaagaccatatgctacagtataaggcaatagcacaggtgaatgaatctgctcttaaa
cagatagaaattgctcacgagaacttcaaagtagaggcggataaattaaagaagtctctc
gagtcagagatcacatcgctccaggaaagggtcaatgaactcgaggctgagtatagtata
aagagaaaagaagcagcatctgcagctgcacttcaagaggaaatttatgcttcttcgttg
tctgaagttgccctgctaaaggaagaaatatcatcaaaaatgtcccagattacgattttg
gagacacagctattggctatgaaggatagtttggaggaggagcagcaaaagtggcggact
gctcagaacaattatgaaagacaggttatactgcagtcggagactatacaagagttaaca
aaaacatcgcaagctctggcatcactacaaaaggaagcatcagaccttcgcaatgtcaca
aacttgcttaaggccgaaaatagtgacttgaaagccaagtgggaaacagagaagctgatg
cttgaaaatttaaagagtgaagcagagaggaaatgtaatgaaattaacgagcagaatgtg
attcttcatagtagacttgaggccttgcacattaagttagctgagagggaacatggttcg
gctggaaattcgtccagaaatgttgaccaagattttcctggtgatgctggtttgcagaat
gtggtgaaatatctgcgacggacaaaggaaattgcagagacagagatttctctgttaaaa
caggagaaatttcggctgcaagcacagcttgacagtgctataaagacggcagagacatcc
caggcatcacttcgagctgagcgagaaaattcacgagcattgttgtactcagacgaagag
ttcaagtcgcttcaacttcaggtcagggagatgaacctgcttcgtgaaagtaatgcccaa
ctcagggaggagaacaagcataactttgatgaatgccagaagctacgtgaaacttctcaa
aaagcgaagactgaaattgagaatttagagacaaaaattgcagtgagagagaatgacgtg
aaagctctgaaaaaagagaaggaaatactagagatggagaaggagcacctcgagaagagg
gttcatgagctgcttgagagatgtcaaaatatcagtgtagaggaatatgatcgcatgaaa
atagatattcagcacatgcagctaaatttaaagggtaaggattcccagttacaagaaatc
cagagatccatctccgagaaggaagaacagatattgcacttggagcaagaagtgggaaga
agcagaaaggaactagatgacagagagaagcgagtaaatgaactcctgaaagttgaggca
tctctgaagtctgatgtggaaaagcagaagaaaatgtcgttgcacttaaagaggaggtta
gaaaacttatccaaggaaaaggaagaattgagcaaagagaaccaatctttgtccaagcag
ttagaggactttaagcaaggaaagaggaatgttgctgatgctctaggtgaacagactatg
agagaaaaagagaaagagaaggatactagaatccagatgcttgaaaaaactgtggagaag
ctgagagatgacttgaggaagcagaaggatgagtataaaatggaaaaaagccagcgcata
aaaacccaaaacacaataagagaattgtgtcatcctattaatcaggaaaagaaaaagctg
gaagaagagctaacaaaacataagcatgctctgaggattgtttcagaaaaagttcagacg
ctgaatcatggtggtagtcagccagagggaacaccggctgttcaggtattttctggaaac
ctcttggatgagatggctactgcttatctactgtcgattgagaattttgagcagtttgca
cagccaattattagcgtagttgaacatcctgctcctgcagattcttccgtagctgcagac
atcctgggttcaggatcttcttcaggtcacacagtccctatacccgcttcagctcaagta
ccccctttgtcaggcatccctccagcaaaaacagcggaagaaagagagaggagggcaaat
ttaacgaaacaatatgctgactctcgtaaagctgggaggaagttggtccgtcctcgtatt
gtgaaacctgaagaacctccagctgatactgaaatgtctgaagcagaggaacctaacaat
ggtggaaagcctacattatctcagaatgttgaaactcactgcaatcctactttattgacc
caacctgctactcggaaacgcgtatctacctcggaattgcaagaagaggcagctattgca
catgatagtaatacggagctctctgcacctctacaaaagaagtctaaaggtttagatttc
tctattgagggcgtagaatcacaatcttccccgattattgaaacccctaaactccctgcc
gttgaagcttctgttgatgtcactgctttacctcatggttccaaagaggaagctagtgct
ggttggaaggatgaaatggagaccattgccgagcaggctgagctgtcaaaatctgatggt
cagaatgaagtggagctgcagaatgagatagctatgggcgaagaggtttcggccggacct
agtgacacagcgggacaagaccttcatccgtttaccgagggtgagcatgaggaaccatta
gcagaatctggaagtgatcgggaagagggtgaacttgctgctgatggtggggatcttgaa
ggtgccggaagtccagaaccagaatgtcaatatgaggaggtggaagctcctgatgattca
cctgatgaaacggttgttcctgtaactgatgatattgaggcaataagttcccctcaagtt
ggggatgacagcaagaatgaagaaggtgagataatggaagagactgttgaaccatctgat
agatcaactggggtcactgatctggcagctgcggaaggtgaacaaattgctacaatttta
gattctggggggagaacttcgagtagtgctgccataactggcatcacagaccacgggagc
attgttgtgccggcacatgacgaagtaaatcaggcatcaccttctcgtaataggtcacca
tctgttgagcaggtgtcgcctgctaataagagctcaaccactatcaatttatctgagaga
gcaaaagaaatgtctgcgctaaggcagcgtccacaagctcgtgggggttctacatcagta
gctagagggcgagcaagaacaatacgagggcgtgctcctccccgtggtttccgtgggcgt
ggaacatctggtcaataa
DBGET
integrated database retrieval system