Apium graveolens (celery): 141713134
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Entry
141713134 CDS
T11340
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
agrv Apium graveolens (celery)
Pathway
agrv03030
DNA replication
agrv03420
Nucleotide excision repair
agrv03430
Mismatch repair
agrv03440
Homologous recombination
agrv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141713134
03420 Nucleotide excision repair
141713134
03430 Mismatch repair
141713134
03440 Homologous recombination
141713134
03460 Fanconi anemia pathway
141713134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agrv03000
]
141713134
03032 DNA replication proteins [BR:
agrv03032
]
141713134
03400 DNA repair and recombination proteins [BR:
agrv03400
]
141713134
Transcription factors [BR:
agrv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
141713134
DNA replication proteins [BR:
agrv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
141713134
DNA repair and recombination proteins [BR:
agrv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
141713134
MMR (mismatch excision repair)
141713134
DSBR (double strand breaks repair)
HR (homologous recombination)
141713134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
DUF223
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
141713134
NCBI-ProteinID:
XP_074372511
LinkDB
All DBs
Position
3:complement(224061974..224065921)
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AA seq
623 aa
AA seq
DB search
MVNTVSPDAISLIMANPSPDSSSSEFPEIVVQVLDLKLTGNSRFRFVANDGKMKLDGMFP
SSLSNEVNSGNIQNLGLIRILDYTLNDIPLKNKKYLIVTKCEVVSPLLEAEIVDEVKNEE
TGILKKPKLDLEVNNMQGLGIVLKPKQEMFTKSAAQIVHEQTGNMAPSARMAMTRRVHPL
VSLNPYQGNWTIKVRLTNKGNMRNYKNARGEGCVFNVELTDEDGTQIQATMFNESAKKFY
DRFQLGKAYYISKGTLRVANKQFKTVQNDYEMTLNENSVVEEAIEEGTFIPETKFNFVPI
DQLGPYVNNSELVDVIGVVQSVSPTMSIRRKSNNENIPKRDITIADESKKTVVVSLWNDL
ATTVGQELLDIADQSPVVAMKSLKVGDFQGVSLSALSRTVILVNPETSESKKLKSWYDSE
GKGSPMASVGTGLSPSSKSGGRSLYADRVSLSYITSNPSFGEEKPVFFSTKGYISFIKPD
QSMWYRACKTCNKKVTEAIGSGFWCEGCQKNDDECNLRYIMVAKVADASGEALLSFFNDQ
AETVVGCSAEELDKLKSQDGDGSSYQMKLKEATWVPHLFRVSVVPQEYNNEKRQRITVRT
VAPVDYAAESRFLLEEIAKMKAS
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatacagtgagcccagatgcaatctcactgattatggctaacccgtctccagat
tcatcttcttcggagtttccagaaattgttgttcaagttcttgatcttaaacttactggc
aatagccgcttcaggtttgtagctaatgatgggaagatgaagcttgatggaatgtttcca
tctagcttgtcgaatgaagttaactccgggaacattcagaacttgggacttattcgtatt
cttgattatactcttaatgacattcctctcaagaataaaaagtacctgattgtaacaaaa
tgtgaggttgtgtctcctctgcttgaagctgaaattgtcgatgaggtgaaaaatgaagaa
acagggattctgaagaagcccaaactggacttggaggtcaataatatgcaaggtcttgga
attgttttaaaaccaaagcaagaaatgttcacgaaatcagctgcacaaatagttcatgaa
caaactggaaatatggccccttctgcgcgaatggcaatgacacggagagttcatccactt
gtttctttgaatccgtatcaaggaaactggaccataaaggttcggctaacaaacaaagga
aacatgcgcaactataagaatgctagaggggaaggttgtgttttcaatgtagagttgaca
gatgaagatggtacacaaattcaagcaacaatgttcaatgagtctgcaaagaagttctac
gacaggtttcaacttggaaaggcttattacatatcaaagggaactctaagagttgctaac
aagcagttcaagactgtacagaatgattatgagatgaccttgaatgaaaattcagtggtg
gaggaggcaattgaagaaggaactttcattcctgaaacaaaatttaattttgttcctatt
gaccagttgggaccatatgtcaataactctgagcttgtggatgttattggtgtggtgcaa
agtgtatcccctaccatgagtatacggagaaaaagcaataatgagaatatccctaaacgt
gacataactattgcagatgagagtaagaagactgttgttgtgtcattgtggaatgatctt
gctactactgttggacaagaactgttggatattgctgatcaatctcctgtagttgcaatg
aaatccttaaaagttggggactttcaaggtgtgtcgttgtccgcattgagcagaactgtt
attttggtgaatccagagacatccgaatcgaaaaagttgaaatcctggtatgattctgaa
ggtaaaggaagtccaatggcttctgtaggcactggcttgagcccgtcttccaagagtgga
ggtcgatctttgtatgctgatagagtatctctttcatacattacatctaacccatccttt
ggtgaagagaagcctgtatttttcagtaccaagggttacataagctttatcaagccagat
cagtcaatgtggtatcgagcttgcaagacatgcaacaagaaggttactgaagctatcggg
tctggattttggtgtgaaggatgccaaaagaatgatgatgaatgcaatttgaggtatatt
atggttgcaaaagttgctgatgcaagtggtgaggccttgctctcttttttcaatgatcaa
gctgaaactgtagttggctgctctgcagaggagcttgacaagttaaaatcacaggatgga
gatggaagttcgtatcaaatgaaattgaaagaagctacatgggtgcctcacctgttccga
gtaagtgttgtcccacaggaatacaacaatgagaagcgacaaagaataactgtccgaact
gttgctcctgttgattacgcagctgagtccagatttttgctggaagagattgcaaaaatg
aaagcttcttaa
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