Apium graveolens (celery): 141713195
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Entry
141713195 CDS
T11340
Name
(RefSeq) LOW QUALITY PROTEIN: putative cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
agrv Apium graveolens (celery)
Pathway
agrv04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
141713195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
agrv04040
]
141713195
Ion channels [BR:
agrv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
141713195
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Paralog
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Motif
Pfam:
Ion_trans
Ion_trans_2
cNMP_binding
DUF507
NinD
Motif
Other DBs
NCBI-GeneID:
141713195
NCBI-ProteinID:
XP_074372593
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Position
3
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AA seq
768 aa
AA seq
DB search
MDPSEKDEVPMLSSRYMQMDEIEKPQFRRSTTRMRSASISIPMPSLDSSDKVNTFIGHTG
PLRSERKVPYIQMSGPLYANRGNEKLFEPAKGAVGSNAMDATFDDYPSIKGVDXNDWSDR
NHERTNEHLLRSGPLGMCSDPYCTTCPTYFKGQRKNVKASSVFEQKFPNINYGDAKGWAR
RTCSSLYEYIPGVMNPHAKVVQKWNKFFVISCLFAVFLDPLFFFLLSVNEKHKCIVFNPT
LTKVLISLRSLTDFIYLLHMLLQFRLAYVAPETRVVGSGDLVDHPKRIALNYLSGYFLID
FFVVLPLPQIIIWLVLEKFKGSSGANYAKNFLRAAILVQYIPRLYRILPMLAGQSASGFI
FESAWANFVINLLTFVLSGHVVGSCWYLFGLQRVNQCLRDACGGGSCIKFIDCGRGDEDE
RFGPDQDWNRWINNGQASACFGEDGFEYGIYQQTVNLTKNSDLTTRYIYSLFWGFQQIST
LAGNQTPSYFVWEVLFTMAIIGLGLLLFALLIGNMQNFLQALGRRRLEMSLRRRDVEQWM
SHRRLPEEQRSQIRESERYNWAATRGVNETMLLENLPEDLQRDIRRHLFNFVKNVRIFTM
MEEPILDAMRERLKTKTYIKGSRILVKGGLIDKMVFIVRGKLESIGEDKNSVPLSEGDVC
GEELLTWCLEHSSVNRDGKRIRIPGYKLLSNRMVRCLTNVEAFTLRAADLEEVTSLFSRF
LRNPRVQGALRYQSPYWRGLAAARIQVAWRYRQKRLSRATTASSELNH
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggatccttcagaaaaagatgaggtaccgatgctatcatccaggtacatgcaaatggat
gaaattgagaaacctcagtttagaaggtccaccaccagaatgcgtagtgcatcaatatcc
attccaatgccttctctggattccagtgataaagttaatacttttataggtcataccggt
cccctgcgcagtgaaagaaaagtaccgtacatacaaatgagtggtcctctatacgcaaac
cgtggaaacgaaaaattatttgagcctgcaaaaggtgcagtgggaagcaacgcaatggat
gctacatttgatgattacccttcaatcaaaggagtagatncaaatgattggtcagataga
aaccatgagaggacaaatgaacatttattaaggtctggtccactgggaatgtgtagtgat
ccttactgcacgacatgcccaacttactttaaggggcagcgaaagaacgttaaagcatct
agtgtatttgagcagaagtttccaaatatcaactatggagatgctaaaggttgggcgcgg
agaacctgttcttcactctatgaatatattccaggggtcatgaatcctcatgctaaagtt
gttcagaagtggaataagttcttcgtcatctcgtgcttatttgctgtttttttggacccg
ctattcttttttcttttgtccgtaaacgagaaacacaaatgcattgtattcaatccaacc
ttgacgaaagtacttatatcgttaagaagcctgactgactttatctacttattgcacatg
cttcttcagtttagattggcttatgttgctcctgaaactagagttgtgggttcgggtgat
ctagttgaccatccaaaaaggatagctctcaattacctctctggatactttcttattgac
ttctttgttgtgttaccacttccccaaatcattatatggctggtccttgaaaagtttaaa
ggatcatctggggcgaattatgcaaaaaactttttgcgagcagcaattcttgttcagtat
attcctagactgtataggattcttcctatgcttgctggtcagtctgcaagtggctttata
tttgagtcggcatgggcaaattttgttatcaatctcctcacttttgtgttgtctggccat
gtggttggatcatgctggtatctttttggattacaaagggtaaatcagtgtcttagagat
gcatgtggtggcggtagctgcataaaatttatagattgtggccgaggtgacgaagatgag
aggttcggacctgatcaagattggaatcgatggataaataacggccaagccagtgcttgt
tttggtgaagacggttttgagtatggaatctaccaacaaactgttaatctcaccaaaaac
tctgaccttaccacgagatacatatattcattattttggggttttcagcaaattagtact
ctggctggaaatcaaactccaagttattttgtttgggaagttctcttcactatggccatc
attggcctgggtcttttgctttttgctcttctcattggaaatatgcagaactttctccag
gctctcggacgcaggaggttagaaatgtctttaaggcgtcgggatgttgagcagtggatg
agtcatcgacgtttgccggaggaacaacgaagtcagattcgtgaatcagaacgttataat
tgggctgccaccagaggggtaaatgaaacaatgctattggagaatctgcctgaagatctt
caaagagatatacgtcgacacctctttaattttgtcaaaaatgtccgaatcttcactatg
atggaggaacccatcttggatgccatgcgtgagagactgaaaacaaaaacatatatcaaa
ggaagcagaattttagttaaaggaggcttgattgataagatggttttcattgttcgtggt
aaacttgagagcatcggagaagataagaatagtgttcctttgtccgaaggggatgtttgc
ggcgaagaacttcttacgtggtgcctcgagcattcttctgttaatagagatggaaaaaga
atcagaattcctggatacaagttgctaagcaatagaatggtaagatgcttaacaaatgta
gaagcatttacactccgagctgcagacctcgaagaagtcactagtcttttctccaggttt
ttgagaaatcctcgtgttcaaggtgcccttaggtatcaatctccttactggcgtggactt
gcagcagctcgtattcaagttgcatggagatataggcagaaacggttgagtcgagcaaca
acggctagttctgaattgaatcactga
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