Apium graveolens (celery): 141713480
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Entry
141713480 CDS
T11340
Name
(RefSeq) uncharacterized protein LOC141713480
KO
K12385
Niemann-Pick C1 protein
Organism
agrv Apium graveolens (celery)
Pathway
agrv04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
141713480
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
141713480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agrv02000
]
141713480
Transporters [BR:
agrv02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
141713480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_N
Sterol-sensing
NPC1_MLD
Patched
TRA2_N
Motif
Other DBs
NCBI-GeneID:
141713480
NCBI-ProteinID:
XP_074373015
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All DBs
Position
3:complement(283521922..283546154)
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AA seq
1301 aa
AA seq
DB search
MAAMYINFSTLLRVTAICLFQVIFVVFIVNSERPETRSLASSNARGGQRHSVDYCAMYDI
CGARSDDKVLNCPFGSPAVQPSDLFSSKIQSLCPTITGNVCCTEKQFDTLRAQVQQAVPL
LVGCPACLRNFLNLFCELTCSPDQSLFINVTSISKVKNNSTVNGIDFYVDDAFGQGLFES
CKDVKFGSMNSRAMEFIGAGAKNFKELYAFLGKQANLNTPGSPYGINFRSDIDDSSAMKL
MNTTTYSCSDSSLGCSCGDCASSSVCSNSAPVSSQKTGSCSVRIGPLKARCIEFSLAILY
ILSVSLLLGWGLFHKKKEKSLASRNKPLVNVTDVGVLHHVNRQKDENVPMQMLEDAPQIR
NGVQLSIVQGYMSKFYRRYGKWVARNPVFVLCSSLVVVLLLCLGLIRFEVETRPEKLWVG
HRSRALQEKDFFDSHLAPFYRIEQLIIATKPDPEHGKSPKIVTEDNIKLLFELQKKVDAV
QANYSGLLVSLTDICLKPLGQDCATQSVLQYFKMDPVIYDGYGDSGIGHVEYCFQQFSSD
DNCRSAFKAPLDPSTALGGFSGNNYSEASAFIITYPVNNALDKKGNETKKAIAWEKAFIQ
LIKDELLPMVQSKNLTISFSSESSIEEELKRESTADAITILISYLVMFAYISLTLGDTPS
FTSFYISSKVLLGFSGVILVMLSVLGSVGFFSAVGVKSTLIIMEVIPFLVLAVGVDNMCI
LVHAAKRQRLELPLERRISSALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAAL
AVLLDFLLQVTAFVALIVLDFLRAEDNRVDCFPCFKISGSYAESDKGIDQSKPGLLARYM
KEVHAPILGIWGVKLAVISVFAALVLASIALSTRIEPGLEQQIVLPRDSYLQHYFDDLSE
YLRIGPPLYFVVKNYNYSSKSNQTNRLCSISNCDSNSLPNEISKASLEPDSSYIAKPASS
WLDDFLVWMSPEAFGCCRKFTNGSYCPPDDQPPCCSSSDGSCSANGFCNDCTTCFRHSEL
QKDRPSTIQFKEKLPWFLSALPSADCAKGGHGAYTTSVELKDYEEGVIQASAFRTYHTPL
NKQIDYVNSLRAARKFSSRISDSLKIELFPYSVFYMFFEQYLDIWKTALINLAIAIGAVF
IVCLAVTFSFWSSGIIILVLTMIVVDLMGVMAILNIQLNAVSVVNLVMAVGIAVEFCVHL
THAFLVSSGDRNQRAAEALGTMGASVFSGITLTKLVGVIVLCFSRTEIFVVYYFQMYLAL
VVLGFLHGLVFLPVFLSMFGPPSRCVLIEKQDNRLSTESQL
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgatgtatattaacttctctacactcctgcgcgtaactgcaatttgtttattc
caggtcatttttgtagtatttatagtcaattccgagcgacctgaaacacgaagtcttgcg
tcttctaatgccagaggcgggcaacggcactctgttgattattgcgcaatgtatgatata
tgtggagccaggagtgatgataaagtactgaactgtccctttggttctccagctgtgcag
cccagtgatttattttcttcaaagatccaaagtttatgtccaacaattacggggaatgtc
tgctgtacagagaagcaatttgatactttgcgggcacaagttcaacaagcggttccttta
cttgtaggttgcccagcatgcctaaggaattttttaaatcttttctgcgagcttacgtgc
tctcctgatcagagtctgttcattaatgtgacttctatatccaaggtcaaaaacaattct
actgtgaatggaatagatttttatgtagatgacgcttttggccaagggttgtttgaatcc
tgcaaggatgtgaagtttggttccatgaatagtcgagccatggaatttattggtgctggt
gccaaaaactttaaagagttgtatgcttttcttggaaaacaagcaaatctaaatacacca
ggatccccatatggaatcaattttagatcagatattgatgactcatcagcaatgaaactt
atgaataccactacttattcatgtagcgacagctcactgggctgttcttgtggtgattgt
gcatcatccagtgtctgttctaattcagctccagtatcatctcagaaaacggggtcttgt
tcagtgagaattggtccccttaaggcaagatgtattgaattttctctagcaatcctctat
atcttatcggtttctctgcttctaggatggggtttatttcataaaaaaaaggaaaagagc
ctagcttctagaaataaacctttggtaaatgttactgatgttggagtactccatcatgtc
aacaggcaaaaggatgaaaatgttccaatgcagatgctcgaggatgccccccaaatcaga
aatggtgtccaactttcaattgttcaaggatatatgtcaaaattttacaggagatatgga
aaatgggttgctagaaatccggtatttgtcttgtgctcatctttggttgtcgttcttctt
ctatgtttgggcctaatccgttttgaagtcgagacacggcctgagaagctttgggtgggc
cacaggagtagagctttgcaagagaaagacttctttgatagtcacttagcacctttctac
agaatcgaacagcttataattgcaacaaaaccagatccagagcatgggaaatcacctaaa
attgtgactgaagataacatcaagttactttttgaattacagaagaaggttgatgcagtc
caagcaaattattccggcttattggtatctctaactgacatatgcttgaagccgttaggc
caggattgtgcaacgcaaagtgttctgcagtatttcaaaatggatccagtaatctatgat
ggctatggggactccggcattggccatgttgaatactgttttcagcaattttcgtcggac
gataactgtaggagtgcctttaaagctccgcttgatccaagtactgcattagggggtttc
tccggaaataattatagtgaggcttctgcatttataattacttatcctgtaaacaatgcg
cttgataaaaaaggaaatgaaactaagaaagccatagcttgggaaaaggctttcatccag
ttaataaaggatgagcttttgccgatggtgcaatccaagaacttgacaatttccttttca
tcagaaagttctattgaagaggaattaaaaagagagagtactgcagatgctataactatt
ctgatcagctatcttgtgatgtttgcctatatatccttgactctcggtgatactcctagt
ttcacatctttttatatttcatcgaaggtcttgcttggtttttcaggggttatacttgtg
atgctatctgtccttggctctgtcggtttctttagtgcggttggagtaaaatctacactt
atcatcatggaagtcatacctttccttgtattggctgttggggtagataacatgtgtata
ctggttcatgctgctaaaaggcagcggttggagttgcctttggaaaggcgtattagtagt
gcacttgtagaagttggaccatcgattacactagctagtctgtctgaggttttggcattc
gcagttggcagttttattccaatgcctgcatgccgagtgttttccatgtttgcagcattg
gctgttctcttggactttcttctgcaggttactgcttttgttgctttaattgttttagat
tttttgagagccgaagataacagggttgattgctttccttgttttaaaatttctggttca
tatgctgaatctgataaaggaattgatcaaagtaaacctggattacttgctcggtatatg
aaggaggttcatgcacccatcctgggtatttggggagtcaagttggcggttatatctgtt
tttgctgctcttgtgctggctagtattgcattatctacgcggattgagcctggtttggag
caacaaattgttctgcctagagactcatatcttcagcactactttgacgatctttcggag
tatctcagaattggcccaccattatactttgttgttaaaaactacaattatagttcaaaa
tcaaaccaaactaaccgattgtgctccatcagcaactgtgactccaattctcttccaaat
gagatttctaaagcatctttggaaccagattcaagttacatagcgaaacctgcttcttcg
tggcttgatgattttctcgtttggatgtctccagaagcttttggttgctgcaggaagttc
acaaacggaagttattgtccacccgatgatcagcctccttgctgctcatcatctgatggc
tcttgtagtgcaaacgggttttgcaatgactgtactacgtgtttccgtcactcagagttg
caaaaggatcgtccatctactatacaatttaaagagaagcttccgtggttcctcagtgct
cttccttcggcggactgtgcaaaaggtggtcatggggcctacactaccagtgttgaactc
aaagattatgaggagggtgtaattcaagcatcagcttttcgtacataccatacgccgctg
aacaaacaaattgactatgtcaactcattaagggctgcaaggaaattttcttcaaggata
tctgactctttgaagattgagctatttccatattccgtattctatatgttttttgagcaa
tatcttgatatatggaagacagccttaattaatctggcaatagctattggtgcggtattt
attgtttgcttagctgtcacatttagtttttggagctcaggtataataatacttgtattg
acaatgattgtggtggatctcatgggggtcatggcaattttgaacatccaactgaatgca
gtctctgttgtcaatcttgtgatggcagtgggtattgccgttgagttttgtgtgcattta
acacatgctttcctggtgagcagtggagataggaatcaacgtgcagcggaggccctgggt
acaatgggagcttctgtttttagtggcataacgctcaccaagttggttggggtaattgtt
ctttgtttctcgaggacagaaatttttgtggtttattacttccaaatgtatttggcccta
gttgtcctcggcttcttgcacggactagtatttttgccagtatttttgagcatgttcggc
ccaccttcaagatgtgtgctcattgagaaacaagataataggctgtcaactgaatcgcaa
ctataa
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