Apium graveolens (celery): 141713718
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Entry
141713718 CDS
T11340
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
agrv Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141713718
03041 Spliceosome [BR:
agrv03041
]
141713718
03036 Chromosome and associated proteins [BR:
agrv03036
]
141713718
Enzymes [BR:
agrv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141713718
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
141713718
mRNA cycle factors
Common to processing body (P body) and stress granule
141713718
Spliceosome [BR:
agrv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
141713718
Chromosome and associated proteins [BR:
agrv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
141713718
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GRP
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
141713718
NCBI-ProteinID:
XP_074373378
LinkDB
All DBs
Position
3:complement(297316148..297321838)
Genome browser
AA seq
625 aa
AA seq
DB search
MMKSSWADAVAEETAASGSSDSNVTSVPLAPVKSAYVPPHLRNRPVAAEPSAPSFTGPPS
GNTGVGYGAGGVGQRPDYGRQINTSSRGGGGWGNRGGREREVNPFGNDDVNVDAEKAFSE
HQNSGINFDAYEDIPVETQGNNVPPPVNTFAEIDLGQALNLNIQRCKYVRPTPVQRYTIP
ISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGNIAQRPRGTRTVFPLALILSPTRELAI
QINDEAKKFSYQTGVRVVVVYGGAPINQQLRELERGVDILVATPGRLVDLLERAKVSLEM
IRYLALDEADRMLDMGFEPQIRKIVQQMGMPPPGERQTMLFSATFPKEIQRLASDFLLNY
IFLTVGRVGSSTDLIVQRVEFVQETDKRSYLMDLLHAQKDDGTHGKQPLTLVFVETKKGA
DSLEHWLCRNGFPATAIHGDRTQQEREYALRSFKSGNTPILVATDVAARGLDIPDVSHVV
NFDIPKDIDDYVHRIGRTGRAGKTGLATAFFNESNMSLAKSLSDLMQEAKQEVPTWLTHY
ASRAFYGGSKNRRPGGGRYGGGRFGGHDFRRDTYNNSGRGSASDSYGGNTGGRYSKNYGG
GYGSGPGANSGGYGPGPGANSAWDE
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatcttcatgggcagatgctgttgctgaagagactgcagcttccgggtcttct
gatagtaatgtaactagtgtacctttagctcctgtcaaatccgcctatgttccgcctcat
ctacgcaataggccagtcgctgcagagccatccgctccgtctttcactggcccaccatca
ggtaatactggtgttggttatggtgcgggtggggttggtcagagacctgactatggccgc
caaatcaacaccagcagcaggggtgggggtggatggggcaacaggggtgggagagaaagg
gaagtgaatccttttggtaatgatgatgttaatgttgatgctgagaaggcattcagtgaa
catcaaaatagtggtattaattttgatgcttacgaggatatcccagtagagactcaaggg
aataatgtgccgcctcctgtcaatacatttgcagagattgatttgggtcaggctctgaat
ttgaatattcaaaggtgcaaatatgtcaggcctactcctgtgcagaggtacacaatcccc
atttccctagcaggacgggatttgatggcttgtgctcaaactgggtctggcaagacagct
gctttttgcttccccataattagtggaattatgagggggaatattgcccagagaccacga
gggacccgtacagtgtttccactagctctcattctttccccgacaagggagcttgcaatt
cagattaatgatgaagcaaagaaattctcttatcaaacaggtgttagagtagtggttgtt
tatggtggagcacctattaatcaacagttaagagaacttgaaagaggagttgatattctt
gtggcaaccccagggaggctagttgatttgcttgagagggcaaaggtctcattggaaatg
attagatatttagctctcgatgaggctgatcgcatgctggatatgggatttgaacctcaa
attagaaagattgttcaacaaatgggcatgcctccgcccggtgaaagacagactatgctg
tttagtgccaccttcccgaaagagatccagagattggcatcggattttcttttgaactac
atattcctgactgttgggagagttggttcaagtacagatctgattgttcaaagagtagag
tttgttcaagagactgacaagagaagttacctcatggacctcctccatgcacaaaaagat
gatggaactcatggaaagcaaccactaacattggtgtttgtggagacgaagaagggagca
gattctcttgaacactggttgtgccgtaacgggtttcctgcaacagctatacatggagat
agaactcaacaggagagagaatatgcgttgagatcgtttaagagtgggaacacaccaatc
ttggtagcaacagatgtagcagcacgaggtcttgacattccagatgtttctcatgtggtc
aatttcgatatcccaaaagacattgacgattatgtccaccggataggaaggacagggcga
gctggaaagacaggattggcgacagctttttttaatgagagcaatatgtcattagcaaaa
tcgctgtctgatctgatgcaagaagctaaacaggaagtacctacttggcttactcattat
gctagcagagctttttatggtggcagtaagaacagacgacccgggggtggacgatatggg
ggagggagatttgggggtcatgacttcagaagggatacttacaataatagtggtagaggc
agtgcttcggattcctatggaggaaacactggtggaagatacagcaaaaattatggtgga
ggatatggttccggacctggagctaacagcggtggatatggtccaggacctggagcaaac
agtgcatgggacgagtga
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