Apium graveolens (celery): 141713810
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Entry
141713810 CDS
T11340
Name
(RefSeq) cell differentiation protein rcd1-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
agrv Apium graveolens (celery)
Pathway
agrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141713810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141713810
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
141713810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
141713810
NCBI-ProteinID:
XP_074373483
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All DBs
Position
3:7405195..7410496
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AA seq
227 aa
AA seq
DB search
MVTSVIGDFSVNEWRPAVLAHWPTDVLKRGLTNPSKSYFTEPSMTDYLVDPAHIDWASAT
IEHLIHLLHVPHLVQHALSYLCQKRESYDGMGILLWHSYKGVTILVEEVKSTARKLFSKN
FTTTDVIRACQAITLLQCLASQRETKQVFLTAKVTDSLCLFLVDMNREEHTLVLRNASLR
AISAFFEADHPVLPDAIDHFLEKNLMACFLSSMEHADLHSQWVMEAD
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggtaacttcagttataggcgatttcagtgtgaatgagtggcgacctgcagtactggct
cattggccaactgatgtgttaaaaagaggactgactaatccttcaaaatcttactttact
gaaccatccatgacagattatctagttgatccggcccacattgactgggcctctgcgacc
atagagcacctgatacaccttcttcatgttccgcacttggtacagcatgcactctcgtat
ctctgtcagaaaagagagagctatgatggaatgggtatcctattgtggcactcttataaa
ggagtaaccatacttgtggaggaagtaaaatcaactgcgaggaagttgttcagcaaaaat
tttacaactacagatgtcattcgagcttgccaagccattacattacttcagtgcctggca
tctcaaagggagacaaagcaggtgttcctaacagccaaggttacagactctctttgccta
ttccttgttgacatgaatcgtgaagagcatacactagttctaaggaatgccagcttgagg
gctatatctgcattttttgaggctgatcacccggttctgccagatgccattgatcatttt
cttgaaaagaatttgatggcatgtttcttgagctcgatggaacatgccgatttacattct
cagtgggtaatggaagctgattag
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