KEGG   Apium graveolens (celery): 141717031
Entry
141717031         CDS       T11340                                 
Name
(RefSeq) TATA-box-binding protein-like
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
agrv  Apium graveolens (celery)
Pathway
agrv03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:agrv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    141717031
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:agrv03000]
    141717031
   03021 Transcription machinery [BR:agrv03021]
    141717031
Transcription factors [BR:agrv03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    141717031
Transcription machinery [BR:agrv03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     141717031
  RNA polymerase III system
    TFIIIB
     141717031
  RNA polymerase I system
    SL1/TIF-1B
     141717031
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 141717031
NCBI-ProteinID: XP_074375261
LinkDB
Position
4
AA seq 186 aa
MDHPSGIVPAIQNIVSTVNLDCHLDLKRIALSARNAEYNPKRFAAVIMRIKEPKTTALIF
SSGKLVVTGAKSEEKSRLAARKFARVVEKIGYAVSFKEFKIQNMVGSCDLKFPIRLEGIS
INHAAFSSYEPELFPGLIYRMKNPKIVLLLFVSGKIVITGGKKKEEIYKAFANIYPVLTQ
FRKNVA
NT seq 561 nt   +upstreamnt  +downstreamnt
atggatcatccctcaggaatcgtacccgcgattcagaacatagtctcgactgtcaacttg
gattgtcacttggacttgaaacgcattgcgttgagcgcaagaaacgccgagtacaaccct
aaaagatttgctgctgtcattatgcgaataaaagagcccaaaacaactgccctcattttc
tcttcaggaaaacttgtcgttaccggagcgaaaagcgaggagaaatcaagactggctgca
cgtaagtttgcgagagttgttgaaaagattgggtacgctgtgagttttaaagagtttaag
atacagaacatggttggttcttgtgacttgaaattccctattcgccttgagggaatttcg
attaatcatgctgcgttttcgagttacgagccagagttgtttcccgggttgatttatagg
atgaagaatcccaagattgtgcttcttctttttgtttctgggaagattgttattactgga
ggcaagaaaaaggaagagatttataaagcgtttgccaatatttatcctgttcttactcag
tttcggaagaacgttgcgtaa

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