Apium graveolens (celery): 141717031
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Entry
141717031 CDS
T11340
Name
(RefSeq) TATA-box-binding protein-like
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
agrv Apium graveolens (celery)
Pathway
agrv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
141717031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agrv03000
]
141717031
03021 Transcription machinery [BR:
agrv03021
]
141717031
Transcription factors [BR:
agrv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
141717031
Transcription machinery [BR:
agrv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
141717031
RNA polymerase III system
TFIIIB
141717031
RNA polymerase I system
SL1/TIF-1B
141717031
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
141717031
NCBI-ProteinID:
XP_074375261
LinkDB
All DBs
Position
4
Genome browser
AA seq
186 aa
AA seq
DB search
MDHPSGIVPAIQNIVSTVNLDCHLDLKRIALSARNAEYNPKRFAAVIMRIKEPKTTALIF
SSGKLVVTGAKSEEKSRLAARKFARVVEKIGYAVSFKEFKIQNMVGSCDLKFPIRLEGIS
INHAAFSSYEPELFPGLIYRMKNPKIVLLLFVSGKIVITGGKKKEEIYKAFANIYPVLTQ
FRKNVA
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggatcatccctcaggaatcgtacccgcgattcagaacatagtctcgactgtcaacttg
gattgtcacttggacttgaaacgcattgcgttgagcgcaagaaacgccgagtacaaccct
aaaagatttgctgctgtcattatgcgaataaaagagcccaaaacaactgccctcattttc
tcttcaggaaaacttgtcgttaccggagcgaaaagcgaggagaaatcaagactggctgca
cgtaagtttgcgagagttgttgaaaagattgggtacgctgtgagttttaaagagtttaag
atacagaacatggttggttcttgtgacttgaaattccctattcgccttgagggaatttcg
attaatcatgctgcgttttcgagttacgagccagagttgtttcccgggttgatttatagg
atgaagaatcccaagattgtgcttcttctttttgtttctgggaagattgttattactgga
ggcaagaaaaaggaagagatttataaagcgtttgccaatatttatcctgttcttactcag
tttcggaagaacgttgcgtaa
DBGET
integrated database retrieval system