Apium graveolens (celery): 141717285
Help
Entry
141717285 CDS
T11340
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic-like
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
141717285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agrv03400
]
141717285
Enzymes [BR:
agrv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
141717285
DNA repair and recombination proteins [BR:
agrv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
141717285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
141717285
NCBI-ProteinID:
XP_074375475
LinkDB
All DBs
Position
4:complement(304563227..304573950)
Genome browser
AA seq
387 aa
AA seq
DB search
MSRVLARRILGLNNLSSVVAVRVACRAYSQAVEIAASKDDEPKAGDIEIDLRHSLGSHHD
VIAQTQAGCVGTTVSKISVANRTNESVYQTPADGPWTVLTHKWPQKGWKAYNPRNMRKPA
LTADIKHVKMMSWNVNGLKRLLESDKNSVMQLAQREDFDILCLQETQLQENDVEAIKSSL
LEGYEHSFWTCSVSKLDYSGTAIISRIKPLSVRYGLGIAEHDDEGRLITLEFDTFYLIGG
YIPNSSTGLKRLAYRVEQWDPALSNYMKELEKLKPVILTGDLNCAHKDIDIHNPGSNKRK
AGFTIEERRSFEKNFLDKGFVDTFRRQHRGVLGYTFWGWDNGRETNKGWRLDYFLVSKSI
MDNVYDSYILPDVASSDHSPIGLVLTL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtgttttagctcgtagaattttagggttaaacaatctttccagtgttgtagct
gttagagtagcctgcagggcctattcacaagctgtggaaattgccgcttccaaagatgat
gaaccgaaagctggagatattgagattgatttgaggcattctctaggctctcatcacgat
gttatagctcagacacaggccggctgtgttggtactactgtttcaaagatttctgtggct
aaccggactaatgaaagtgtgtatcagaccccagcagatggtccatggactgttcttaca
cacaagtggccacaaaaggggtggaaagcttacaatcctcgaaatatgaggaagcctgct
cttactgctgatataaagcatgttaagatgatgtcttggaatgtcaacggcttaaagcgt
ttactcgaatctgataaaaattctgttatgcaacttgcacaaagggaagactttgatatc
ttgtgcttgcaagagacccaattacaggagaatgatgttgaggcaatcaaaagctctctt
cttgaaggatatgaacatagcttttggacatgtagcgtctcaaagcttgattattctggc
actgcaattatctcaaggattaaaccactttcagtgagatatggcctcggaatagcagaa
catgatgatgaaggacgtctgattacattagagtttgatactttctatctaataggcgga
tatattccaaattcaagtactggtctaaaaagattggcatacagagttgaacagtgggat
cctgctttaagcaattacatgaaagagctagaaaagttgaaacctgttattttgactggg
gatttgaactgcgcgcataaagatattgatattcataaccctggaagcaataaaagaaaa
gcaggttttacaattgaagaaaggcggtcattcgagaagaacttcttagataaaggtttc
gttgacacatttaggagacagcatcgtggtgtacttggctatactttctggggttgggat
aatggacgtgagacaaataaaggatggcgcctggattacttccttgtttcgaagtccatc
atggacaatgtttacgactcatacattctcccagatgttgctagtagtgatcatagtccg
atcggcctcgttctcacactctag
DBGET
integrated database retrieval system
