Apium graveolens (celery): 141717540
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Entry
141717540 CDS
T11340
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141717540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141717540
03110 Chaperones and folding catalysts [BR:
agrv03110
]
141717540
03029 Mitochondrial biogenesis [BR:
agrv03029
]
141717540
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agrv04147
]
141717540
Enzymes [BR:
agrv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
141717540
Messenger RNA biogenesis [BR:
agrv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
141717540
Chaperones and folding catalysts [BR:
agrv03110
]
Heat shock proteins
HSP60 / Chaperonin
141717540
Mitochondrial biogenesis [BR:
agrv03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
141717540
Exosome [BR:
agrv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141717540
Exosomal proteins of other body fluids (saliva and urine)
141717540
Exosomal proteins of breast cancer cells
141717540
Exosomal proteins of colorectal cancer cells
141717540
Exosomal proteins of bladder cancer cells
141717540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
141717540
NCBI-ProteinID:
XP_074375760
LinkDB
All DBs
Position
4:complement(4579852..4584702)
Genome browser
AA seq
605 aa
AA seq
DB search
MASSVLSVASLSLPCTRMMDTKNTTSFKSLSSFASVSSSSLQVRRNVVVHKKCSLEVRAM
AKELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAREV
ELEDPVENIGAKLVRQAASKTNDMAGDGTTTSVVLAQGFINEGVKVVAAGANPIQITRGI
EKTIKSLVAELKLMSKEVEDSELADVAAVSAGNNPEVGKMIAEAMSKVGRKGVVTLEEGK
SAENNLYVVEGMQFDRGYISPYFVTDSEKMTVEYENCKLLLVDKKITNARDIINLLEDAI
KGGYPILIIAEDIEQEALATLVVNRLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVI
REEVGLSLDTASKEVLGHAAKVVLTKDTTTIVGDGSTQESVNRRVAQIRNLAEAAEQDYE
KEKLSERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLR
LAAKVDAIKDTLDNAEQKVGADIVKRALRYPMKLIAKNAGVNGSVVIEKVLTNDDQKYGY
NAATGKYEDLMAAGIIDPTKVVRCCLEHAASVARTFLTSDAVVVDIKEPESVPAGNPMDN
SGYGY
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatcggtgctatctgttgcttcgttgtcattgccttgcactcgtatgatggat
accaagaatacaacttcgttcaagagtttatcgtcatttgcttcggtatcttcgagttct
cttcaagtgagaaggaatgtggttgtccataagaaatgttctcttgaagtcagggcaatg
gcgaaggagcttcatttcaacaaagacggttctgctatcaagaagttgcagacgggtgtt
aacaagcttgctgatctagtcggggttactctaggtccaaaaggacgaaatgttgtttta
gagagcaagtatggctcaccaaaaatcgtgaatgatggtgtaactgtggctagagaggtt
gaattggaagatcctgttgagaatattggtgcaaagttagttagacaggcggcatccaag
accaatgatatggctggcgacggaacaacaacatctgtagttctcgcccaaggctttatc
aatgaaggagtcaaggtggttgcagctggtgcaaacccaatccagattaccagaggtatt
gagaagaccatcaaatccctggtcgccgagcttaaattgatgtcaaaagaggttgaggac
agtgaattagccgatgtagctgcagttagtgctggaaacaatcctgaagtaggtaaaatg
atagctgaagcaatgagtaaagttggaagaaaaggtgtggtgactcttgaggagggaaaa
agcgctgaaaacaatttgtatgttgtggaaggcatgcaattcgaccgtggctacatttct
ccctattttgtgacagacagtgagaaaatgactgttgaatatgaaaattgcaagttgctt
ttggttgacaagaagataacaaatgcaagagatataataaatcttttggaagatgctatc
aagggaggatatccaatacttataattgcagaagatattgagcaggaagctcttgctact
cttgtggttaataggctcagaggggcacttaaaattgctgcactaaaggctcctgggttt
ggggaacgcaagagccaatatcttgatgacattgccatcctcaccggcggaactgtcatt
agggaagaagtaggcttgtccctggacacggcaagtaaggaagtcctcgggcatgctgct
aaagtggtacttaccaaggatacgacaacaattgtcggtgatgggagtacccaagaatca
gtgaacagacgagttgcgcaaataaggaatctcgctgaggcagcagagcaggactatgaa
aaggaaaagctaagtgaacgaattgcaaaactttcagggggtgttgctgtcattcaggtt
ggggcacaaacagaaacagaacttaaagaaaagaaattgagagtagaggatgccttaaat
gcaacaaaggcagctgttgaagaaggaattgtagttggtggtggctgcaccttactgcgc
cttgcagcgaaagtcgacgccatcaaagatactcttgataatgctgagcagaaggtagga
gctgatattgttaagagggcattgagatacccaatgaagttaatcgccaagaatgcaggg
gtcaacggaagtgttgtaattgaaaaggtgctcactaatgatgatcaaaagtatggttac
aatgccgcaacaggaaagtatgaggacttgatggctgctggtatcattgatcctacaaag
gtggtgagatgttgcttggagcatgctgcttcagttgcaaggaccttccttacatcagat
gccgtggttgttgacatcaaggagcctgaaagcgtgcctgctggaaatccaatggataat
tcaggttatggatactga
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