Apium graveolens (celery): 141717594
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Entry
141717594 CDS
T11340
Name
(RefSeq) oligouridylate-binding protein 1B-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
agrv Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141717594
03041 Spliceosome [BR:
agrv03041
]
141717594
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
141717594
Spliceosome [BR:
agrv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
141717594
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_10
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
141717594
NCBI-ProteinID:
XP_074375842
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Position
4:complement(5748336..5753966)
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AA seq
432 aa
AA seq
DB search
MQQQQEERLKQQQQAAALMHHHQQQQAAAAAAAAAMLQQQSLYHHPSLLLPPQMEPFPSG
NLPPKFDPSTCRSVYIGNIHTQVTEPLLQEVFSSTGLVESCKLIRKEKSSYGFVHYFDRR
CAGIAILSLNGRHLFGQPIKVNWAYASGQREDTSSHYNIFVGDLSSEVTDATLFACFSVY
SSCSDARVMWDQKTGRSRGFGFVSFKNQHDAQSAINDLTGKWLGSKQIRCNWATKGAGIT
DENPSSDAKSVVELTNGSTEDGMELANNEAPENSPQYTTVYVGNLPPEATQIDLHCFFHA
LGAGVIEEVRVQRDKGFGFVRYSNHSEAALAIQLGNTHSNLYGRQIKCSWGSKPTPPGIT
SNPLPPPAPMQGLYERQLALSKMGGVHALMHPQAQLQIKQGSLGMGTAGASQAIYDGGFQ
NVAAAQQLMYYQ
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaacaacaagaagagagattgaagcaacaacaacaagcagcagctctaatgcat
catcatcaacaacaacaagctgcagcagcagcagcagcagcagctatgcttcaacaacaa
tcactttatcatcatcctagccttttattacctcctcagatggagccgtttcctagtgga
aatctgcctcctaagtttgacccaagtacttgtcgcagtgtatacattgggaacattcat
acacaagtcactgaacctcttcttcaagaggtgttctcaagtaccggtcttgttgaaagc
tgcaaattaattaggaaggagaagtcatcctatggatttgtccactacttcgatcgtaga
tgtgcagggattgctatattatcacttaatggaagacatctgtttggacagcctattaaa
gtgaattgggcttatgcaagtggtcagagagaggacacttcaagtcattacaacatattt
gtaggtgatctcagctctgaagttactgatgctacattgtttgcatgtttctctgtttat
agcagttgctctgatgcaagggttatgtgggatcagaagactggtcgatcgagaggattt
ggatttgtatctttcaaaaatcaacatgatgctcaaagtgcaattaatgatcttactgga
aaatggcttggcagtaaacaaatacgttgtaactgggcgacaaaaggtgctggtattact
gatgagaatccaagttcagatgccaaaagcgttgtagaattaacgaatggatctacagaa
gatggtatggagttggcaaataatgaggcgcctgagaacagtccacagtacacgactgtc
tatgttggcaaccttcctccagaggcaacacagatagacttgcattgcttctttcatgct
ctcggagctggagtaattgaggaagttcgtgtgcagcgtgataaaggttttggatttgtt
agatacagtaatcattctgaggcagcattggctatccagctgggaaatacccattcaaat
ctttatggaagacagatcaagtgctcatggggtagcaagcctactccacctgggataacc
tcaaatccgcttcctccacctgcacctatgcaaggcctctatgagcgacaattagctctg
agcaagatgggtggtgttcatgccttgatgcaccctcaagcgcagcttcaaatcaaacag
ggatctttgggaatgggtactgctggagcaagccaggccatatatgatggaggctttcag
aatgttgctgctgctcagcagctcatgtactaccagtga
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