Apium graveolens (celery): 141718103
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Entry
141718103 CDS
T11340
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
agrv
Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
agrv03036
]
141718103
Chromosome and associated proteins [BR:
agrv03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
141718103
REST complex
141718103
Heterochromatin formation proteins
Other heterochromatin formation proteins
141718103
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
141718103
NCBI-ProteinID:
XP_074376570
LinkDB
All DBs
Position
4:complement(79822583..79833230)
Genome browser
AA seq
1324 aa
AA seq
DB search
MKRFRDDYVNSQFKRSFGSSRAEPYAQPHAAGGGSAGPAAQRLTTNDALSYLKEVKDMFH
DQREKYDTFLDVMKDFKAQRIDTTGVIARVKDLFRGHNNLIFGFNTFLPKGYEITVIEEG
EAPPKKTVEFEEAISFVNKIKKRFQNDDDHVYKSFLDILNMYRKEHKGIEEVYHEVAALF
DDHPDLLDEFIRFLPDASAVASAHNASVGRQLLNRYDERSSAVLAQRGTPMDKQRFQRDR
IIAPHTEHDPNLEHPDLDEKTMIKLHKEQRRRSEKINLDRRNRDQDFRDSEQDMHRTPEK
RKSSRKVDGFGGDHFSGPYDDTDSLKSIYKQEFIFCEKVKERLRSPADYQAFLKCLHIYS
TDIITRSELQGLVADLIGKDTDLMEGFKDFLELCEGTDGFLAGVMSKKHFWTEGFASKTL
KVEERERDPRRDIDLIKERDRVKEKYWGKSIQELDLTSCQRCTPSYRLLPDDYPIPLASQ
KSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVTATAKR
AEELLNIMNKNSINSESTICVEDHFSALNFRCIERLYGDHGLDVLDILRKNTSLSLPVIL
IRLKQKQEEWSKCRLDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVTEVKEL
KEKRKQEDSMLLNVSAACRHPITPDLEFDYSDVKIHEDFYKLIKYSCDEICATKEQSKKA
MRLWSTFLEPMLSVPSRPLDPEDSDAMQSDETDIKEKDGSPSAADPEAINLKEAKTLPNG
DVSPDLKQASNACILSADISVEGDGVGLQKALDLANVNGTSTCAKRLASSDAALVKAGHD
VAQRPSIHASENGQGIACEINDMHNLDVLRSVTSAAVSGVLTDVPSVPKCKEDLVDASKV
EKEEGELSPTGDFEEDVSVAERSAETTRHEARTGEDTSCQHVRENDADADDENSENVSEA
GEDVSGSESAADERSHEENEEEDGDHDENDCKGESECEAEGLDDAVTEEDGLLSPSSEKF
LLTSKPLAKHVSSALRDTGKSSKVFYGNDAFYVLFRLHQIMYERLLFAKRHSSSGEPKMR
NVNDACPADLYSRFLGALYDLLDGSSDNAKFEDDCRAIIGNQAYVLFTLDKLIYKIVKQL
QTVASEEMDSKLLQLNEYEKSRKSDKYVDSVYYENAHVLLHDENIYRFECTSAQSHMSIQ
LMDDGNEKKEVVAVSMDPNFAAYLNDDYLSIPINKDSDGIILQRNKRLYADHDENSALGI
AMEDVKVVNGLECKMACNSSKISYVLDTEDLIYRERRNRRKLSTLSDQADAKVQKFHRFL
TASI
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctttcgagatgattatgttaattcgcaatttaaacgctctttcggttcttct
cgtgctgaaccatatgctcaacctcatgctgcgggaggaggaagtgcaggtcctgcagca
caaagacttacgaccaatgatgcattgagttatttgaaggaagttaaggacatgtttcat
gatcagagagagaaatatgacacttttcttgatgtaatgaaagattttaaggctcaaaga
attgatactactggtgtcattgcgagggtgaaagatttgtttagagggcacaataatctt
atttttggtttcaatacattcttacctaaaggctatgaaattacggttattgaggaagga
gaggctccgccaaagaaaactgttgagtttgaagaggctataagttttgtaaacaagata
aagaaaagatttcaaaatgatgatgatcatgtgtacaaatcttttctagacatactgaac
atgtacagaaaggagcataagggtattgaagaggtctaccatgaggttgctgcacttttt
gatgatcatccagatttgcttgacgagttcataagatttttacctgatgcttcagcagtt
gcatcagcacacaatgcttcagttggcaggcaactgttgaatcgctatgatgagcgcagt
tctgctgtgttagcacagagaggcacaccaatggataagcagcgttttcagcgggacaga
attattgctcctcacactgagcatgatccaaatcttgagcatcctgatttagatgagaaa
acaatgataaagttgcacaaagagcagagaaggagatctgaaaagattaaccttgacagg
aggaatcgcgatcaagattttagagattctgagcaagacatgcatcgtacacctgagaaa
aggaaatcttctaggaaggtggatggctttggaggggatcatttttcgggcccatacgat
gatacagattccttaaaaagtatttacaagcaagaattcattttttgtgaaaaagtgaag
gagagactacgaagtccagcagattaccaggcgttcttgaagtgtcttcatatttatagc
accgatataataacaagaagtgaattacagggtttggttgcagatttaattggaaaagac
acagatcttatggaagggttcaaggattttctggaactatgcgaaggaactgatggattc
cttgctggggtaatgagcaaaaaacatttctggactgaaggatttgcatccaaaacactg
aaggtagaggaaagagaaagggatcctcgacgtgacatagatttaattaaagaaagggat
agggtgaaggagaaatattggggaaaatccatacaagagctggatctcactagctgtcaa
cggtgtactcctagttacaggcttcttcctgatgattatccaataccattggcaagccag
aaatcagagctgggagcacaggtactgaatgatcactgggtatctgtgacttcaggtagt
gaggattactctttcaaacatatgcgcagaaaccaatatgaagagagtctgtttagatgt
gaagatgataggtttgagctcgatatgttgctggaatctgtgactgcaactgctaagcgt
gcggaggagttgctgaacatcatgaacaaaaattctataaattctgagagcactatctgc
gtggaagaccacttctcagcccttaattttaggtgcattgaacgtttatatggtgatcat
ggactggatgttttggatatattacgtaaaaatacatccctttctttgcctgttatatta
atacgcctgaagcagaaacaagaggagtggtcgaagtgtcggttagatttcaataaagtt
tgggctgaaatctatgctaagaatcattacaagtcgcttgatcaccgtagtttctatttc
aagcagcaagattcaaagaatttgagcacaaaatcattagtgactgaagttaaagaacta
aaggagaaaagaaagcaggaggatagtatgcttctcaacgtatctgctgcgtgcagacat
cctataactccagatcttgaatttgactactctgatgttaagattcatgaagacttctat
aagcttataaagtattcgtgtgacgaaatttgtgcaaccaaagagcagtcaaaaaaggct
atgaggctttggagtacatttttggagcccatgttgagtgttccttcgcggccccttgat
cctgaggattctgatgcaatgcaaagtgatgaaacagacatcaaagaaaaagatggaagc
cctagtgccgctgatcctgaagctattaacttgaaagaagcaaaaactttgcccaatgga
gatgtgtccccagatctaaagcaagctagcaatgcctgcatattaagtgcggatatatct
gtcgaaggtgatggagttggtttacaaaaagctctagaccttgcaaatgttaatgggaca
tctacttgtgctaagcgtttagccagttcggatgcagcacttgttaaagcagggcatgat
gtagctcagaggcctagtatccatgctagtgaaaatggtcagggaatagcttgtgaaatc
aatgacatgcacaatcttgatgttttgagatcagtcacaagtgcagccgtaagtggggtt
ctgacagatgtccccagtgtgcccaagtgcaaggaagatttagttgatgcttctaaggtc
gaaaaagaagaaggggagctgtcacctaccggtgattttgaagaggatgtttctgttgca
gagagaagtgcagaaactacaaggcatgaggcaaggactggtgaagacacctcttgtcag
catgttagagagaatgatgcagatgctgatgacgagaacagcgaaaatgtttctgaggct
ggtgaagatgtttccggcagcgagtcagctgctgatgagcgctcccatgaagagaatgaa
gaggaagatggagaccatgatgaaaatgattgtaaaggtgaaagtgaatgtgaagctgag
ggtttggatgatgcagttactgaagaagatggacttttatcaccatcatctgagaagttt
ctgctaacctcaaaacctctggcaaagcatgtttcgtctgcattacgtgatacaggaaaa
agttccaaggttttctatgggaatgatgcattttatgtgcttttccgtcttcaccagata
atgtatgaaagattgttatttgcgaagagacattcttcttcgggggaaccaaaaatgaga
aatgtgaatgatgcttgtccagctgacctatattccaggtttctgggtgcattatatgat
ttgcttgatggctcatctgataatgcaaagtttgaggatgattgccgagcaattatcggt
aatcaggcttatgtgctgtttactctggacaaattgatatataagattgttaaacagctt
caaactgttgcaagtgaggagatggatagcaagctgctccaattgaatgagtacgagaaa
tcacgaaaatctgataaatatgttgattcagtttattatgaaaatgcacatgtccttctc
catgatgaaaacatataccgatttgaatgtacgtcggcccagtcgcatatgtcaatacag
cttatggatgatggaaatgaaaagaaagaggtggttgcagtatccatggatcctaatttt
gcagcttatcttaatgatgattatttgtcgattcctatcaataaggattccgacggaatc
atattgcaaaggaataaacgcttgtatgcggaccatgatgaaaattctgctttaggcatt
gctatggaagatgtcaaagtggtgaatggcttagagtgcaagatggcttgtaactcatca
aagatatcctatgtcctagacacggaagatctcatctatcgcgaaagaagaaacagaaga
aaattgtctacattgtctgaccaggctgacgcaaaagtgcaaaagttccaccgtttctta
acagcttcaatatga
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