Apium graveolens (celery): 141720290
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Entry
141720290 CDS
T11340
Name
(RefSeq) cell differentiation protein rcd1-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
agrv Apium graveolens (celery)
Pathway
agrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141720290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141720290
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
141720290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
141720290
NCBI-ProteinID:
XP_074378735
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All DBs
Position
4:complement(315998548..316003119)
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AA seq
280 aa
AA seq
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MLNLPDSLYPDPIQADNTVMSNGGAPANNNGPCDGASKAIDWPSASVEDLVVLLREPEHR
EKAISSLTQIKCFATHPQTKMQFLNVQIHRYLYPFLETEETSKPFLYLRLMSLGVIGGLL
KEVGDPSTKVAVHCLLESGLFPLCLKSIEYGNELSQSIASWIMSRIMMQEQGLQYCCEPA
NQWCAIMKVFNDIIEKMQDEPSSLVLKNIIQCYIILSNDPSRGCLLLRSFIPPILTTAPY
IEALRARPVTLKNLQNLFQKLSMGWGPNAEAVARSSHLDR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatctccctgactctctttatcctgatccgatacaagctgacaacactgttatg
tcgaatggtggtgcacctgctaacaacaatggtccctgtgatggtgctagcaaagctatt
gattggccttctgctagtgtagaggacttggttgtgttgcttcgagaacctgagcatcgc
gaaaaggccatttcatctcttactcagattaagtgctttgccactcaccctcaaacgaag
atgcagttccttaatgttcagatacatcgttacttgtaccctttcttggagactgaagaa
acgagcaagccattcctgtacctaaggctaatgagcttgggggtcattggtggtcttctg
aaagaggtaggcgacccttcgacaaaggttgctgttcactgtttgcttgaatcaggactc
ttccctttgtgtctaaaatccatagaatatggaaacgaactttcacaatcaattgcatct
tggataatgtcaagaataatgatgcaagagcagggactacagtattgctgtgagcctgca
aaccagtggtgtgcaatcatgaaggtttttaatgacataattgaaaagatgcaggatgaa
ccgtcttctttagttttgaagaatattattcaatgttatatcatactgtccaatgatcca
agcaggggttgtctcctcctgagaagcttcattccgccaatactgacgactgccccatat
attgaagcccttcgtgcacgccctgtaaccttaaaaaatttgcaaaatttgtttcaaaag
ctatcgatgggatgggggccaaatgcagaagcagttgcacgttcctcacatcttgatcgc
taa
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