Apium graveolens (celery): 141720294
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Entry
141720294 CDS
T11340
Name
(RefSeq) cell differentiation protein rcd1-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
agrv Apium graveolens (celery)
Pathway
agrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141720294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141720294
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
141720294
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
RabGAP-TBC
CRAL_TRIO
Motif
Other DBs
NCBI-GeneID:
141720294
NCBI-ProteinID:
XP_074378740
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Position
4:complement(316148878..316152940)
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AA seq
276 aa
AA seq
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MLNLPDSLYPDPIQGDNSVMSNGGAPANNNGPCDGASKAIDWPSASVEDLVVLLREPEHR
EKAISSLTHIKEVLSIYKSLTPEKLTMKDSSKVCDVLVLFEVISAPLISFSSVQIHCYLY
PFLETEETSKPFQYLRLMSLGVIGGLLKEVGDPSTKVAVHCLLESGLFPLCLKSIEYGNE
LSQSTASWIMSRIMMQEQGLQYCCEPANRLCAIMKVFNDVIEKMQDEPSTTFLKNIIQCY
VIMSDDPRTCVKNVSDQAPDSLRVVLCPLGRSGCCT
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatctccctgactctctttatcctgatccgatacaaggtgacaacagtgttatg
tcgaatggtggtgcacctgctaacaacaatggtccctgtgatggtgctagcaaagctatt
gattggccttctgctagtgtagaggacttggttgtgttgcttcgagaacctgagcatcgc
gaaaaggccatttcatctcttactcacattaaggaagtattatctatatacaagtcatta
acacctgagaaacttactatgaaagattcaagtaaagtttgtgatgtacttgttttgttt
gaggtcatttccgctcctttaatttccttttctagtgttcagatacattgttacttgtac
cctttcttggagactgaagaaacgagcaagccattccagtacctaaggctaatgagcttg
ggggtcattggtggtcttctgaaggaggtaggcgacccttcgacaaaggttgctgttcac
tgtttgcttgaatcaggactcttccctttgtgtttaaaatccatagaatatggaaacgaa
ctttcacaatcaactgcatcttggataatgtcaagaataatgatgcaagagcagggacta
cagtattgctgtgagcctgcaaaccggttgtgtgcaatcatgaaggtttttaatgacgta
attgaaaagatgcaggatgaaccgtctactacatttttgaagaatattattcaatgttat
gtcataatgtccgatgatccaagaacttgtgtaaaaaatgtctctgaccaagcaccggat
agcttgagagtggttttatgtccgttggggcggtctggttgttgtacttaa
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