Apium graveolens (celery): 141720300
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Entry
141720300 CDS
T11340
Name
(RefSeq) cell differentiation protein rcd1-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
agrv Apium graveolens (celery)
Pathway
agrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141720300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141720300
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
141720300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
CRAL_TRIO
Motif
Other DBs
NCBI-GeneID:
141720300
NCBI-ProteinID:
XP_074378745
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All DBs
Position
4:complement(316245947..316250885)
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AA seq
313 aa
AA seq
DB search
MLNLPDSLYPDPIQGDNSVMSNGGAPANNNGPCDGASKAIDWPSASVEDLVVLLREPEHR
EKAISSLTQIKEVLSIYKSLTPEKLTMKDSSKVCDVLVLFECLATHPQTKMQFLNVQIHC
YLYPFLETEETSKPFQYLRLMSLGVIGGLLKEVGDPSTKVAVHCLLESGLFPLCLKSIEY
GNELSQSTASWIMSRIMMQEQGLQYCCEPANRLCAIMKVFNDVIEKMQDEPSTTVLKNII
QCYVILSDDPSRGCLLLRSFIPPILTTAPYIEALRARPITLKNLQDLFQKLSMGCGPNAE
AVGDVAGSSHLDR
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatctccctgactctctttatcctgatccgatacaaggtgacaacagtgttatg
tcgaatggtggtgcacctgctaacaacaatggtccctgtgatggtgctagcaaagctatt
gattggccttctgctagtgtagaggacttggttgtgttgcttcgagaacctgagcatcgc
gaaaaggccatttcatctcttactcagattaaggaagtattatctatatacaagtcatta
acacctgagaaacttactatgaaagattcaagtaaagtttgtgatgtacttgttttgttt
gagtgcttggccactcaccctcaaacgaagatgcagttccttaatgttcagatacattgt
tacttgtaccctttcttggagactgaagaaacgagcaagccattccagtacctaaggcta
atgagcttgggggtcattggtggtcttctgaaggaggtaggcgacccttcgacaaaggtt
gctgttcactgtttgcttgaatcaggactcttccctttgtgtctaaaatccatagaatat
ggaaacgaactttcacaatcaactgcatcttggataatgtcaagaataatgatgcaagag
cagggactacagtattgctgtgagcctgcaaaccggttgtgtgcaatcatgaaggttttt
aatgacgtaattgaaaagatgcaggatgaaccgtctactacagttttgaagaatattatt
caatgttatgtcatactgtccgatgatccaagcaggggttgtctcctcttgagaagcttc
attccgccaatactgacgactgccccatatattgaagcccttcgtgcacgccctataacc
ttaaaaaatttacaagatttgtttcaaaagctatcgatgggatgcgggccaaatgcagaa
gccgttggtgatgttgcaggttcctcacatcttgatcgctag
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